Results 121 - 123 of 123 are showing below:
Show page:
<< Previous Page | Next Page >>
ID | Location | Perfect MFE.* | RefSeq Acc. | strand | Start Position |
R_P_ratio![]() |
P value |
Predicted miRNA align pattern | |||||||
32775 | 5' | -56.7 | NC_007346.1 | + | 128455 | 0.66 | 0.983703 |
Target: 5'- uGGCGccugccaccAUGguGGAgGcGGCGgCGGugGa -3' miRNA: 3'- -CCGU---------UACguCCUgCaCCGUgGCCugC- -5' |
|||||||
32775 | 5' | -56.7 | NC_007346.1 | + | 244773 | 0.66 | 0.983703 |
Target: 5'- cGGCGAUGCAGuGGCcauuuagGGaACUGGugGc -3' miRNA: 3'- -CCGUUACGUC-CUGca-----CCgUGGCCugC- -5' |
|||||||
32775 | 5' | -56.7 | NC_007346.1 | + | 261862 | 0.66 | 0.986901 |
Target: 5'- -uCGAUGCAGGAacaacGCACCGGcaGCGg -3' miRNA: 3'- ccGUUACGUCCUgcac-CGUGGCC--UGC- -5' |
<< Previous Page | Next Page >>
Note:
When operating RNAhybrid, the pipeline first calculates the perfect minimum free energy (Perfect mfe *) of a putative miRNA when the entire putative miRNA binds to a perfectly complementary target site, then it calculates the minimum free energy of RNA duplex (mfe of the miRNA/mRNA duplex), abbreviated as Rd_mfe. An alignment for which the Rd_mfe to its correspondent Perfect mfe ratio (R_P_ratio #) is more than 66% is regarded as a positive alignment as described by Krek et al. (21). The P_value is calculated by RNAhybrid.
Back To miRNA display CGI home