Results 61 - 80 of 95 are showing below:
Show page:
<< Previous Page | Next Page >>
ID | Location | Perfect MFE.* | RefSeq Acc. | strand | Start Position |
R_P_ratio![]() |
P value |
Predicted miRNA align pattern | |||||||
33275 | 3' | -52.4 | NC_007605.1 | + | 164982 | 0.67 | 0.960935 |
Target: 5'- cCUGa-AGCCCguGAGCuGGCCUGACGa -3' miRNA: 3'- -GACcgUCGGGauUUCGuCUGGAUUGU- -5' |
|||||||
33275 | 3' | -52.4 | NC_007605.1 | + | 5209 | 0.67 | 0.95717 |
Target: 5'- gUGGCacGGCCUgccAGGGCAGAgucCCUGGCc -3' miRNA: 3'- gACCG--UCGGGa--UUUCGUCU---GGAUUGu -5' |
|||||||
33275 | 3' | -52.4 | NC_007605.1 | + | 16824 | 0.67 | 0.964465 |
Target: 5'- cCUGGCGGCCC---AGCccGACCcccgGGCGc -3' miRNA: 3'- -GACCGUCGGGauuUCGu-CUGGa---UUGU- -5' |
|||||||
33275 | 3' | -52.4 | NC_007605.1 | + | 19893 | 0.67 | 0.964465 |
Target: 5'- cCUGGCGGCCC---AGCccGACCcccgGGCGc -3' miRNA: 3'- -GACCGUCGGGauuUCGu-CUGGa---UUGU- -5' |
|||||||
33275 | 3' | -52.4 | NC_007605.1 | + | 54028 | 0.67 | 0.964465 |
Target: 5'- -aGGCcGCCCUGgcccGGGCAGcgGCCgggAACGg -3' miRNA: 3'- gaCCGuCGGGAU----UUCGUC--UGGa--UUGU- -5' |
|||||||
33275 | 3' | -52.4 | NC_007605.1 | + | 154142 | 0.67 | 0.964465 |
Target: 5'- gUGGaGGCCCUGAGccccgccaaccuGCAGGCCcUGGCc -3' miRNA: 3'- gACCgUCGGGAUUU------------CGUCUGG-AUUGu -5' |
|||||||
33275 | 3' | -52.4 | NC_007605.1 | + | 54523 | 0.67 | 0.967765 |
Target: 5'- -cGGUAGCCgCggggguGGCGGGCCaAGCGu -3' miRNA: 3'- gaCCGUCGG-Gauu---UCGUCUGGaUUGU- -5' |
|||||||
33275 | 3' | -52.4 | NC_007605.1 | + | 35237 | 0.67 | 0.964465 |
Target: 5'- cCUGGCGGCCC---AGCccGACCcccgGGCGc -3' miRNA: 3'- -GACCGUCGGGauuUCGu-CUGGa---UUGU- -5' |
|||||||
33275 | 3' | -52.4 | NC_007605.1 | + | 32168 | 0.67 | 0.964465 |
Target: 5'- cCUGGCGGCCC---AGCccGACCcccgGGCGc -3' miRNA: 3'- -GACCGUCGGGauuUCGu-CUGGa---UUGU- -5' |
|||||||
33275 | 3' | -52.4 | NC_007605.1 | + | 29099 | 0.67 | 0.964465 |
Target: 5'- cCUGGCGGCCC---AGCccGACCcccgGGCGc -3' miRNA: 3'- -GACCGUCGGGauuUCGu-CUGGa---UUGU- -5' |
|||||||
33275 | 3' | -52.4 | NC_007605.1 | + | 22961 | 0.67 | 0.964465 |
Target: 5'- cCUGGCGGCCC---AGCccGACCcccgGGCGc -3' miRNA: 3'- -GACCGUCGGGauuUCGu-CUGGa---UUGU- -5' |
|||||||
33275 | 3' | -52.4 | NC_007605.1 | + | 84359 | 0.66 | 0.983132 |
Target: 5'- -aGGCAGCCagaacAGAGCAGccaagagccacGCCUGAa- -3' miRNA: 3'- gaCCGUCGGga---UUUCGUC-----------UGGAUUgu -5' |
|||||||
33275 | 3' | -52.4 | NC_007605.1 | + | 150889 | 0.66 | 0.983132 |
Target: 5'- cCUGGuCAGCCgCagagGAAGCAuGACCUugggguggGACGg -3' miRNA: 3'- -GACC-GUCGG-Ga---UUUCGU-CUGGA--------UUGU- -5' |
|||||||
33275 | 3' | -52.4 | NC_007605.1 | + | 10575 | 0.66 | 0.982933 |
Target: 5'- -gGGCccaGGCCUUGcaGGGCAGACgguuaggCUGACAa -3' miRNA: 3'- gaCCG---UCGGGAU--UUCGUCUG-------GAUUGU- -5' |
|||||||
33275 | 3' | -52.4 | NC_007605.1 | + | 133685 | 0.66 | 0.98106 |
Target: 5'- -aGGCuGCCCUGAuccucucGguGGCCUAc-- -3' miRNA: 3'- gaCCGuCGGGAUUu------CguCUGGAUugu -5' |
|||||||
33275 | 3' | -52.4 | NC_007605.1 | + | 61028 | 0.66 | 0.98106 |
Target: 5'- -gGGCAGCUCguUGGAGaGGACCcGGCGa -3' miRNA: 3'- gaCCGUCGGG--AUUUCgUCUGGaUUGU- -5' |
|||||||
33275 | 3' | -52.4 | NC_007605.1 | + | 55043 | 0.66 | 0.98106 |
Target: 5'- gUGGCGGgCUUAAAGCcuucGGCCUccaGGCGc -3' miRNA: 3'- gACCGUCgGGAUUUCGu---CUGGA---UUGU- -5' |
|||||||
33275 | 3' | -52.4 | NC_007605.1 | + | 150624 | 0.66 | 0.979038 |
Target: 5'- -gGGCGGCCCgggcuccagcagaacGucGCAGACCcAGCc -3' miRNA: 3'- gaCCGUCGGGa--------------UuuCGUCUGGaUUGu -5' |
|||||||
33275 | 3' | -52.4 | NC_007605.1 | + | 81496 | 0.66 | 0.978804 |
Target: 5'- cCUGGgAGCcaucCCUGAcacaggcugcggGGCAGGCCUuuGCAc -3' miRNA: 3'- -GACCgUCG----GGAUU------------UCGUCUGGAu-UGU- -5' |
|||||||
33275 | 3' | -52.4 | NC_007605.1 | + | 61362 | 0.66 | 0.98106 |
Target: 5'- -cGGCGGCCCc---GCGGACa-GACGu -3' miRNA: 3'- gaCCGUCGGGauuuCGUCUGgaUUGU- -5' |
<< Previous Page | Next Page >>
Note:
When operating RNAhybrid, the pipeline first calculates the perfect minimum free energy (Perfect mfe *) of a putative miRNA when the entire putative miRNA binds to a perfectly complementary target site, then it calculates the minimum free energy of RNA duplex (mfe of the miRNA/mRNA duplex), abbreviated as Rd_mfe. An alignment for which the Rd_mfe to its correspondent Perfect mfe ratio (R_P_ratio #) is more than 66% is regarded as a positive alignment as described by Krek et al. (21). The P_value is calculated by RNAhybrid.
Back To miRNA display CGI home