miRNA display CGI

Results 41 - 45 of 45 are showing below:
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ID	Location	Perfect MFE.*	RefSeq Acc.	strand	Start Position	R_P_ratio#	P value
	Predicted miRNA align pattern
33288	5'	-55.7	NC_007605.1	+	135067	0.67	0.872938
	Target:  5'- gACcUGGCUCAGGUCCGGcgcccugcGCAGuCCAa -3' miRNA:   3'- -UGuAUCGAGUCUAGGUC--------CGUCcGGUc -5'
33288	5'	-55.7	NC_007605.1	+	148938	0.66	0.913066
	Target:  5'- gGCAagGGCUCA---CCAGGgAGGCCuGg -3' miRNA:   3'- -UGUa-UCGAGUcuaGGUCCgUCCGGuC- -5'
33288	5'	-55.7	NC_007605.1	+	154128	0.7	0.741434
	Target:  5'- --uUGGCgCGGAUCCucGCAGGCCGc -3' miRNA:   3'- uguAUCGaGUCUAGGucCGUCCGGUc -5'
33288	5'	-55.7	NC_007605.1	+	160614	0.66	0.913066
	Target:  5'- ---cAGCUCGG--CCA-GCAGGCCGGc -3' miRNA:   3'- uguaUCGAGUCuaGGUcCGUCCGGUC- -5'
33288	5'	-55.7	NC_007605.1	+	166789	0.7	0.701381
	Target:  5'- cCGUAGa--AGAgCCGGGCAGGCCGc -3' miRNA:   3'- uGUAUCgagUCUaGGUCCGUCCGGUc -5'

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Note:
      When operating RNAhybrid, the pipeline first calculates the perfect minimum free energy (Perfect mfe *) of a putative miRNA when the entire putative miRNA binds to a perfectly complementary target site, then it calculates the minimum free energy of RNA duplex (mfe of the miRNA/mRNA duplex), abbreviated as Rd_mfe. An alignment for which the Rd_mfe to its correspondent Perfect mfe ratio (R_P_ratio #) is more than 66% is regarded as a positive alignment as described by Krek et al. (21). The P_value is calculated by RNAhybrid.

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