Results 61 - 80 of 232 are showing below:
Show page:
<< Previous Page | Next Page >>
ID | Location | Perfect MFE.* | RefSeq Acc. | strand | Start Position |
R_P_ratio![]() |
P value |
Predicted miRNA align pattern | |||||||
33341 | 5' | -55.4 | NC_007605.1 | + | 35016 | 0.67 | 0.866749 |
Target: 5'- cGGGAAGGAGaGGCCaggggagAGGGAaGGCg -3' miRNA: 3'- uUCCUUCUUC-CCGGag-----UCCCUaUCGg -5' |
|||||||
33341 | 5' | -55.4 | NC_007605.1 | + | 28878 | 0.67 | 0.866749 |
Target: 5'- cGGGAAGGAGaGGCCaggggagAGGGAaGGCg -3' miRNA: 3'- uUCCUUCUUC-CCGGag-----UCCCUaUCGg -5' |
|||||||
33341 | 5' | -55.4 | NC_007605.1 | + | 19671 | 0.67 | 0.866749 |
Target: 5'- cGGGAAGGAGaGGCCaggggagAGGGAaGGCg -3' miRNA: 3'- uUCCUUCUUC-CCGGag-----UCCCUaUCGg -5' |
|||||||
33341 | 5' | -55.4 | NC_007605.1 | + | 16602 | 0.67 | 0.866749 |
Target: 5'- cGGGAAGGAGaGGCCaggggagAGGGAaGGCg -3' miRNA: 3'- uUCCUUCUUC-CCGGag-----UCCCUaUCGg -5' |
|||||||
33341 | 5' | -55.4 | NC_007605.1 | + | 22740 | 0.67 | 0.866749 |
Target: 5'- cGGGAAGGAGaGGCCaggggagAGGGAaGGCg -3' miRNA: 3'- uUCCUUCUUC-CCGGag-----UCCCUaUCGg -5' |
|||||||
33341 | 5' | -55.4 | NC_007605.1 | + | 31947 | 0.67 | 0.866749 |
Target: 5'- cGGGAAGGAGaGGCCaggggagAGGGAaGGCg -3' miRNA: 3'- uUCCUUCUUC-CCGGag-----UCCCUaUCGg -5' |
|||||||
33341 | 5' | -55.4 | NC_007605.1 | + | 25809 | 0.67 | 0.866749 |
Target: 5'- cGGGAAGGAGaGGCCaggggagAGGGAaGGCg -3' miRNA: 3'- uUCCUUCUUC-CCGGag-----UCCCUaUCGg -5' |
|||||||
33341 | 5' | -55.4 | NC_007605.1 | + | 32423 | 0.67 | 0.874194 |
Target: 5'- gGAGGggGcuGGGCCUCacccucGGGGAcc-CCu -3' miRNA: 3'- -UUCCuuCuuCCCGGAG------UCCCUaucGG- -5' |
|||||||
33341 | 5' | -55.4 | NC_007605.1 | + | 13533 | 0.67 | 0.866749 |
Target: 5'- cGGGAAGGAGaGGCCaggggagAGGGAaGGCg -3' miRNA: 3'- uUCCUUCUUC-CCGGag-----UCCCUaUCGg -5' |
|||||||
33341 | 5' | -55.4 | NC_007605.1 | + | 114863 | 0.67 | 0.874194 |
Target: 5'- uGAGGAA--GGGGCCUCGgccuGGGGUaaGGUg -3' miRNA: 3'- -UUCCUUcuUCCCGGAGU----CCCUA--UCGg -5' |
|||||||
33341 | 5' | -55.4 | NC_007605.1 | + | 84593 | 0.67 | 0.89518 |
Target: 5'- -uGGAGGAccacugugGGGGCCugggauUCAGGcGUGGCUc -3' miRNA: 3'- uuCCUUCU--------UCCCGG------AGUCCcUAUCGG- -5' |
|||||||
33341 | 5' | -55.4 | NC_007605.1 | + | 90411 | 0.67 | 0.866749 |
Target: 5'- uGGGGcucauGGAGGGGCggCAGcGGAUGGUg -3' miRNA: 3'- uUCCU-----UCUUCCCGgaGUC-CCUAUCGg -5' |
|||||||
33341 | 5' | -55.4 | NC_007605.1 | + | 82754 | 0.67 | 0.89518 |
Target: 5'- cAGGccacucGGGGGCCUgAGGGcagGGCCu -3' miRNA: 3'- uUCCuuc---UUCCCGGAgUCCCua-UCGG- -5' |
|||||||
33341 | 5' | -55.4 | NC_007605.1 | + | 62317 | 0.67 | 0.89518 |
Target: 5'- -uGGggGcGGGGCCggCGGGGGagagGGUg -3' miRNA: 3'- uuCCuuCuUCCCGGa-GUCCCUa---UCGg -5' |
|||||||
33341 | 5' | -55.4 | NC_007605.1 | + | 17079 | 0.67 | 0.874194 |
Target: 5'- gGAGGggGcuGGGCCUCacccucGGGGAcc-CCu -3' miRNA: 3'- -UUCCuuCuuCCCGGAG------UCCCUaucGG- -5' |
|||||||
33341 | 5' | -55.4 | NC_007605.1 | + | 23216 | 0.67 | 0.874194 |
Target: 5'- gGAGGggGcuGGGCCUCacccucGGGGAcc-CCu -3' miRNA: 3'- -UUCCuuCuuCCCGGAG------UCCCUaucGG- -5' |
|||||||
33341 | 5' | -55.4 | NC_007605.1 | + | 26285 | 0.67 | 0.874194 |
Target: 5'- gGAGGggGcuGGGCCUCacccucGGGGAcc-CCu -3' miRNA: 3'- -UUCCuuCuuCCCGGAG------UCCCUaucGG- -5' |
|||||||
33341 | 5' | -55.4 | NC_007605.1 | + | 29354 | 0.67 | 0.874194 |
Target: 5'- gGAGGggGcuGGGCCUCacccucGGGGAcc-CCu -3' miRNA: 3'- -UUCCuuCuuCCCGGAG------UCCCUaucGG- -5' |
|||||||
33341 | 5' | -55.4 | NC_007605.1 | + | 14010 | 0.67 | 0.874194 |
Target: 5'- gGAGGggGcuGGGCCUCacccucGGGGAcc-CCu -3' miRNA: 3'- -UUCCuuCuuCCCGGAG------UCCCUaucGG- -5' |
|||||||
33341 | 5' | -55.4 | NC_007605.1 | + | 116757 | 0.67 | 0.866749 |
Target: 5'- gGGGGGAGggGGGCac---GGAUgAGCCc -3' miRNA: 3'- -UUCCUUCuuCCCGgagucCCUA-UCGG- -5' |
<< Previous Page | Next Page >>
Note:
When operating RNAhybrid, the pipeline first calculates the perfect minimum free energy (Perfect mfe *) of a putative miRNA when the entire putative miRNA binds to a perfectly complementary target site, then it calculates the minimum free energy of RNA duplex (mfe of the miRNA/mRNA duplex), abbreviated as Rd_mfe. An alignment for which the Rd_mfe to its correspondent Perfect mfe ratio (R_P_ratio #) is more than 66% is regarded as a positive alignment as described by Krek et al. (21). The P_value is calculated by RNAhybrid.
Back To miRNA display CGI home