Results 101 - 120 of 232 are showing below:
Show page:
<< Previous Page | Next Page >>
ID | Location | Perfect MFE.* | RefSeq Acc. | strand | Start Position | R_P_ratio# | P value |
Predicted miRNA align pattern | |||||||
33341 | 5' | -55.4 | NC_007605.1 | + | 27555 | 0.68 | 0.826421 |
Target: 5'- cAGGggGAcccgAGGGCCUUAGa---GGCCa -3' miRNA: 3'- uUCCuuCU----UCCCGGAGUCccuaUCGG- -5' |
|||||||
33341 | 5' | -55.4 | NC_007605.1 | + | 95942 | 0.68 | 0.817784 |
Target: 5'- cAGGAGGAGGGGCaggagCAGGaGGaggGGCa -3' miRNA: 3'- uUCCUUCUUCCCGga---GUCC-CUa--UCGg -5' |
|||||||
33341 | 5' | -55.4 | NC_007605.1 | + | 96158 | 0.68 | 0.817784 |
Target: 5'- cAGGAGGAGGGGCaggagCAGGaggGGCa -3' miRNA: 3'- uUCCUUCUUCCCGga---GUCCcuaUCGg -5' |
|||||||
33341 | 5' | -55.4 | NC_007605.1 | + | 12408 | 0.68 | 0.834878 |
Target: 5'- cGAGGAGGcgcccggaguGGGGCCggucggCuGGGcUGGCCg -3' miRNA: 3'- -UUCCUUCu---------UCCCGGa-----GuCCCuAUCGG- -5' |
|||||||
33341 | 5' | -55.4 | NC_007605.1 | + | 18546 | 0.68 | 0.834878 |
Target: 5'- cGAGGAGGcgcccggaguGGGGCCggucggCuGGGcUGGCCg -3' miRNA: 3'- -UUCCUUCu---------UCCCGGa-----GuCCCuAUCGG- -5' |
|||||||
33341 | 5' | -55.4 | NC_007605.1 | + | 21615 | 0.68 | 0.834878 |
Target: 5'- cGAGGAGGcgcccggaguGGGGCCggucggCuGGGcUGGCCg -3' miRNA: 3'- -UUCCUUCu---------UCCCGGa-----GuCCCuAUCGG- -5' |
|||||||
33341 | 5' | -55.4 | NC_007605.1 | + | 24684 | 0.68 | 0.834878 |
Target: 5'- cGAGGAGGcgcccggaguGGGGCCggucggCuGGGcUGGCCg -3' miRNA: 3'- -UUCCUUCu---------UCCCGGa-----GuCCCuAUCGG- -5' |
|||||||
33341 | 5' | -55.4 | NC_007605.1 | + | 27753 | 0.68 | 0.834878 |
Target: 5'- cGAGGAGGcgcccggaguGGGGCCggucggCuGGGcUGGCCg -3' miRNA: 3'- -UUCCUUCu---------UCCCGGa-----GuCCCuAUCGG- -5' |
|||||||
33341 | 5' | -55.4 | NC_007605.1 | + | 30822 | 0.68 | 0.834878 |
Target: 5'- cGAGGAGGcgcccggaguGGGGCCggucggCuGGGcUGGCCg -3' miRNA: 3'- -UUCCUUCu---------UCCCGGa-----GuCCCuAUCGG- -5' |
|||||||
33341 | 5' | -55.4 | NC_007605.1 | + | 95879 | 0.68 | 0.817784 |
Target: 5'- cAGGAGGAGGGGCaggagCAGGaGGaggGGCa -3' miRNA: 3'- uUCCUUCUUCCCGga---GUCC-CUa--UCGg -5' |
|||||||
33341 | 5' | -55.4 | NC_007605.1 | + | 57364 | 0.68 | 0.817784 |
Target: 5'- cAGGAGGAGGaGCC---GGGGUAGCUg -3' miRNA: 3'- uUCCUUCUUCcCGGaguCCCUAUCGG- -5' |
|||||||
33341 | 5' | -55.4 | NC_007605.1 | + | 34629 | 0.68 | 0.81691 |
Target: 5'- --cGGAGAGGGGCCUCuuuGGGcccucaaGUccAGCCc -3' miRNA: 3'- uucCUUCUUCCCGGAGu--CCC-------UA--UCGG- -5' |
|||||||
33341 | 5' | -55.4 | NC_007605.1 | + | 12210 | 0.68 | 0.859089 |
Target: 5'- cAGGggGAcccgAGGGCCUUAGaGGcccaGGCg -3' miRNA: 3'- uUCCuuCU----UCCCGGAGUC-CCua--UCGg -5' |
|||||||
33341 | 5' | -55.4 | NC_007605.1 | + | 15477 | 0.68 | 0.834878 |
Target: 5'- cGAGGAGGcgcccggaguGGGGCCggucggCuGGGcUGGCCg -3' miRNA: 3'- -UUCCUUCu---------UCCCGGa-----GuCCCuAUCGG- -5' |
|||||||
33341 | 5' | -55.4 | NC_007605.1 | + | 21417 | 0.68 | 0.826421 |
Target: 5'- cAGGggGAcccgAGGGCCUUAGa---GGCCa -3' miRNA: 3'- uUCCuuCU----UCCCGGAGUCccuaUCGG- -5' |
|||||||
33341 | 5' | -55.4 | NC_007605.1 | + | 19284 | 0.68 | 0.81691 |
Target: 5'- --cGGAGAGGGGCCUCuuuGGGcccucaaGUccAGCCc -3' miRNA: 3'- uucCUUCUUCCCGGAGu--CCC-------UA--UCGG- -5' |
|||||||
33341 | 5' | -55.4 | NC_007605.1 | + | 22353 | 0.68 | 0.81691 |
Target: 5'- --cGGAGAGGGGCCUCuuuGGGcccucaaGUccAGCCc -3' miRNA: 3'- uucCUUCUUCCCGGAGu--CCC-------UA--UCGG- -5' |
|||||||
33341 | 5' | -55.4 | NC_007605.1 | + | 25422 | 0.68 | 0.81691 |
Target: 5'- --cGGAGAGGGGCCUCuuuGGGcccucaaGUccAGCCc -3' miRNA: 3'- uucCUUCUUCCCGGAGu--CCC-------UA--UCGG- -5' |
|||||||
33341 | 5' | -55.4 | NC_007605.1 | + | 31560 | 0.68 | 0.81691 |
Target: 5'- --cGGAGAGGGGCCUCuuuGGGcccucaaGUccAGCCc -3' miRNA: 3'- uucCUUCUUCCCGGAGu--CCC-------UA--UCGG- -5' |
|||||||
33341 | 5' | -55.4 | NC_007605.1 | + | 28491 | 0.68 | 0.81691 |
Target: 5'- --cGGAGAGGGGCCUCuuuGGGcccucaaGUccAGCCc -3' miRNA: 3'- uucCUUCUUCCCGGAGu--CCC-------UA--UCGG- -5' |
<< Previous Page | Next Page >>
Note:
When operating RNAhybrid, the pipeline first calculates the perfect minimum free energy (Perfect mfe *) of a putative miRNA when the entire putative miRNA binds to a perfectly complementary target site, then it calculates the minimum free energy of RNA duplex (mfe of the miRNA/mRNA duplex), abbreviated as Rd_mfe. An alignment for which the Rd_mfe to its correspondent Perfect mfe ratio (R_P_ratio #) is more than 66% is regarded as a positive alignment as described by Krek et al. (21). The P_value is calculated by RNAhybrid.
Back To miRNA display CGI home