miRNA display CGI

Results 121 - 128 of 128 are showing below:
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ID	Location	Perfect MFE.*	RefSeq Acc.	strand	Start Position	R_P_ratio#	P value
	Predicted miRNA align pattern
33372	3'	-36.5	NC_007605.1	+	156525	0.67	1
	Target:  5'- ----gAAGGAGAUGAAACCAg- -3' miRNA:   3'- gauagUUCCUUUGUUUUGGUga -5'
33372	3'	-36.5	NC_007605.1	+	96577	0.67	1
	Target:  5'- -gGUCGAGGAgguaGugGAGGCCGg- -3' miRNA:   3'- gaUAGUUCCU----UugUUUUGGUga -5'
33372	3'	-36.5	NC_007605.1	+	10097	0.66	1
	Target:  5'- ----aAAGGAAuuuACAAAGCCAUg -3' miRNA:   3'- gauagUUCCUU---UGUUUUGGUGa -5'
33372	3'	-36.5	NC_007605.1	+	47143	0.66	1
	Target:  5'- -aGUCGAGGAuACGGGcGCCAg- -3' miRNA:   3'- gaUAGUUCCUuUGUUU-UGGUga -5'
33372	3'	-36.5	NC_007605.1	+	12690	0.66	1
	Target:  5'- --uUCAGGGGcAGCAGGcucACCACc -3' miRNA:   3'- gauAGUUCCU-UUGUUU---UGGUGa -5'
33372	3'	-36.5	NC_007605.1	+	15759	0.66	1
	Target:  5'- --uUCAGGGGcAGCAGGcucACCACc -3' miRNA:   3'- gauAGUUCCU-UUGUUU---UGGUGa -5'
33372	3'	-36.5	NC_007605.1	+	18828	0.66	1
	Target:  5'- --uUCAGGGGcAGCAGGcucACCACc -3' miRNA:   3'- gauAGUUCCU-UUGUUU---UGGUGa -5'
33372	3'	-36.5	NC_007605.1	+	56836	0.72	1
	Target:  5'- -gAUCAGGGAAGCGuucuUCACUg -3' miRNA:   3'- gaUAGUUCCUUUGUuuu-GGUGA- -5'

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Note:
      When operating RNAhybrid, the pipeline first calculates the perfect minimum free energy (Perfect mfe *) of a putative miRNA when the entire putative miRNA binds to a perfectly complementary target site, then it calculates the minimum free energy of RNA duplex (mfe of the miRNA/mRNA duplex), abbreviated as Rd_mfe. An alignment for which the Rd_mfe to its correspondent Perfect mfe ratio (R_P_ratio #) is more than 66% is regarded as a positive alignment as described by Krek et al. (21). The P_value is calculated by RNAhybrid.

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