Results 81 - 100 of 269 are showing below:
Show page:
<< Previous Page | Next Page >>
ID | Location | Perfect MFE.* | RefSeq Acc. |
strand![]() |
Start Position | R_P_ratio# | P value |
Predicted miRNA align pattern | |||||||
33460 | 5' | -62 | NC_007605.1 | + | 143082 | 0.74 | 0.283794 |
Target: 5'- gGGGGCggCCGGGUGGCCCaccGGGUCCgCUg -3' miRNA: 3'- gCUCUG--GGCUCACCGGG---CCUAGGgGG- -5' |
|||||||
33460 | 5' | -62 | NC_007605.1 | + | 12614 | 0.74 | 0.290094 |
Target: 5'- uGAGACCCuccgGGCCCGGAcggucgCCCUCa -3' miRNA: 3'- gCUCUGGGcucaCCGGGCCUa-----GGGGG- -5' |
|||||||
33460 | 5' | -62 | NC_007605.1 | + | 15683 | 0.74 | 0.290094 |
Target: 5'- uGAGACCCuccgGGCCCGGAcggucgCCCUCa -3' miRNA: 3'- gCUCUGGGcucaCCGGGCCUa-----GGGGG- -5' |
|||||||
33460 | 5' | -62 | NC_007605.1 | + | 18752 | 0.74 | 0.290094 |
Target: 5'- uGAGACCCuccgGGCCCGGAcggucgCCCUCa -3' miRNA: 3'- gCUCUGGGcucaCCGGGCCUa-----GGGGG- -5' |
|||||||
33460 | 5' | -62 | NC_007605.1 | + | 21821 | 0.74 | 0.290094 |
Target: 5'- uGAGACCCuccgGGCCCGGAcggucgCCCUCa -3' miRNA: 3'- gCUCUGGGcucaCCGGGCCUa-----GGGGG- -5' |
|||||||
33460 | 5' | -62 | NC_007605.1 | + | 24890 | 0.74 | 0.290094 |
Target: 5'- uGAGACCCuccgGGCCCGGAcggucgCCCUCa -3' miRNA: 3'- gCUCUGGGcucaCCGGGCCUa-----GGGGG- -5' |
|||||||
33460 | 5' | -62 | NC_007605.1 | + | 27958 | 0.74 | 0.290094 |
Target: 5'- uGAGACCCuccgGGCCCGGAcggucgCCCUCa -3' miRNA: 3'- gCUCUGGGcucaCCGGGCCUa-----GGGGG- -5' |
|||||||
33460 | 5' | -62 | NC_007605.1 | + | 142675 | 0.74 | 0.283794 |
Target: 5'- gGGGGCggCCGGGUGGCCCaccGGGUCCgCUg -3' miRNA: 3'- gCUCUG--GGCUCACCGGG---CCUAGGgGG- -5' |
|||||||
33460 | 5' | -62 | NC_007605.1 | + | 142573 | 0.74 | 0.283794 |
Target: 5'- gGGGGCggCCGGGUGGCCCaccGGGUCCgCUg -3' miRNA: 3'- gCUCUG--GGCUCACCGGG---CCUAGGgGG- -5' |
|||||||
33460 | 5' | -62 | NC_007605.1 | + | 142471 | 0.74 | 0.283794 |
Target: 5'- gGGGGCggCCGGGUGGCCCaccGGGUCCgCUg -3' miRNA: 3'- gCUCUG--GGCUCACCGGG---CCUAGGgGG- -5' |
|||||||
33460 | 5' | -62 | NC_007605.1 | + | 141554 | 0.74 | 0.283794 |
Target: 5'- gGGGGCggCCGGGUGGCCCaccGGGUCCgCUg -3' miRNA: 3'- gCUCUG--GGCUCACCGGG---CCUAGGgGG- -5' |
|||||||
33460 | 5' | -62 | NC_007605.1 | + | 141656 | 0.74 | 0.283794 |
Target: 5'- gGGGGCggCCGGGUGGCCCaccGGGUCCgCUg -3' miRNA: 3'- gCUCUG--GGCUCACCGGG---CCUAGGgGG- -5' |
|||||||
33460 | 5' | -62 | NC_007605.1 | + | 141757 | 0.74 | 0.283794 |
Target: 5'- gGGGGCggCCGGGUGGCCCaccGGGUCCgCUg -3' miRNA: 3'- gCUCUG--GGCUCACCGGG---CCUAGGgGG- -5' |
|||||||
33460 | 5' | -62 | NC_007605.1 | + | 141859 | 0.74 | 0.283794 |
Target: 5'- gGGGGCggCCGGGUGGCCCaccGGGUCCgCUg -3' miRNA: 3'- gCUCUG--GGCUCACCGGG---CCUAGGgGG- -5' |
|||||||
33460 | 5' | -62 | NC_007605.1 | + | 141961 | 0.74 | 0.283794 |
Target: 5'- gGGGGCggCCGGGUGGCCCaccGGGUCCgCUg -3' miRNA: 3'- gCUCUG--GGCUCACCGGG---CCUAGGgGG- -5' |
|||||||
33460 | 5' | -62 | NC_007605.1 | + | 142063 | 0.74 | 0.283794 |
Target: 5'- gGGGGCggCCGGGUGGCCCaccGGGUCCgCUg -3' miRNA: 3'- gCUCUG--GGCUCACCGGG---CCUAGGgGG- -5' |
|||||||
33460 | 5' | -62 | NC_007605.1 | + | 142165 | 0.74 | 0.283794 |
Target: 5'- gGGGGCggCCGGGUGGCCCaccGGGUCCgCUg -3' miRNA: 3'- gCUCUG--GGCUCACCGGG---CCUAGGgGG- -5' |
|||||||
33460 | 5' | -62 | NC_007605.1 | + | 142267 | 0.74 | 0.283794 |
Target: 5'- gGGGGCggCCGGGUGGCCCaccGGGUCCgCUg -3' miRNA: 3'- gCUCUG--GGCUCACCGGG---CCUAGGgGG- -5' |
|||||||
33460 | 5' | -62 | NC_007605.1 | + | 142369 | 0.74 | 0.283794 |
Target: 5'- gGGGGCggCCGGGUGGCCCaccGGGUCCgCUg -3' miRNA: 3'- gCUCUG--GGCUCACCGGG---CCUAGGgGG- -5' |
|||||||
33460 | 5' | -62 | NC_007605.1 | + | 31027 | 0.74 | 0.290094 |
Target: 5'- uGAGACCCuccgGGCCCGGAcggucgCCCUCa -3' miRNA: 3'- gCUCUGGGcucaCCGGGCCUa-----GGGGG- -5' |
<< Previous Page | Next Page >>
Note:
When operating RNAhybrid, the pipeline first calculates the perfect minimum free energy (Perfect mfe *) of a putative miRNA when the entire putative miRNA binds to a perfectly complementary target site, then it calculates the minimum free energy of RNA duplex (mfe of the miRNA/mRNA duplex), abbreviated as Rd_mfe. An alignment for which the Rd_mfe to its correspondent Perfect mfe ratio (R_P_ratio #) is more than 66% is regarded as a positive alignment as described by Krek et al. (21). The P_value is calculated by RNAhybrid.
Back To miRNA display CGI home