Results 101 - 120 of 180 are showing below:
Show page:
<< Previous Page | Next Page >>
ID | Location | Perfect MFE.* | RefSeq Acc. | strand | Start Position | R_P_ratio# | P value |
Predicted miRNA align pattern | |||||||
33468 | 3' | -58.1 | NC_007605.1 | + | 16049 | 0.69 | 0.667229 |
Target: 5'- cAGGGuGCCUCcccGGGUCC-CAGG-CCa -3' miRNA: 3'- -UCCC-CGGAGaaaCCCGGGaGUUCaGG- -5' |
|||||||
33468 | 3' | -58.1 | NC_007605.1 | + | 19118 | 0.69 | 0.667229 |
Target: 5'- cAGGGuGCCUCcccGGGUCC-CAGG-CCa -3' miRNA: 3'- -UCCC-CGGAGaaaCCCGGGaGUUCaGG- -5' |
|||||||
33468 | 3' | -58.1 | NC_007605.1 | + | 22187 | 0.69 | 0.667229 |
Target: 5'- cAGGGuGCCUCcccGGGUCC-CAGG-CCa -3' miRNA: 3'- -UCCC-CGGAGaaaCCCGGGaGUUCaGG- -5' |
|||||||
33468 | 3' | -58.1 | NC_007605.1 | + | 25256 | 0.69 | 0.667229 |
Target: 5'- cAGGGuGCCUCcccGGGUCC-CAGG-CCa -3' miRNA: 3'- -UCCC-CGGAGaaaCCCGGGaGUUCaGG- -5' |
|||||||
33468 | 3' | -58.1 | NC_007605.1 | + | 28325 | 0.69 | 0.667229 |
Target: 5'- cAGGGuGCCUCcccGGGUCC-CAGG-CCa -3' miRNA: 3'- -UCCC-CGGAGaaaCCCGGGaGUUCaGG- -5' |
|||||||
33468 | 3' | -58.1 | NC_007605.1 | + | 31394 | 0.69 | 0.667229 |
Target: 5'- cAGGGuGCCUCcccGGGUCC-CAGG-CCa -3' miRNA: 3'- -UCCC-CGGAGaaaCCCGGGaGUUCaGG- -5' |
|||||||
33468 | 3' | -58.1 | NC_007605.1 | + | 149589 | 0.71 | 0.567055 |
Target: 5'- gAGGGG-CUCUggGGuGCCCg-AGGUCCc -3' miRNA: 3'- -UCCCCgGAGAaaCC-CGGGagUUCAGG- -5' |
|||||||
33468 | 3' | -58.1 | NC_007605.1 | + | 152658 | 0.71 | 0.567055 |
Target: 5'- gAGGGG-CUCUggGGuGCCCg-AGGUCCc -3' miRNA: 3'- -UCCCCgGAGAaaCC-CGGGagUUCAGG- -5' |
|||||||
33468 | 3' | -58.1 | NC_007605.1 | + | 155726 | 0.71 | 0.567055 |
Target: 5'- gAGGGG-CUCUggGGuGCCCg-AGGUCCc -3' miRNA: 3'- -UCCCCgGAGAaaCC-CGGGagUUCAGG- -5' |
|||||||
33468 | 3' | -58.1 | NC_007605.1 | + | 158795 | 0.71 | 0.567055 |
Target: 5'- gAGGGG-CUCUggGGuGCCCg-AGGUCCc -3' miRNA: 3'- -UCCCCgGAGAaaCC-CGGGagUUCAGG- -5' |
|||||||
33468 | 3' | -58.1 | NC_007605.1 | + | 56082 | 0.7 | 0.606969 |
Target: 5'- gAGaGGCCUCUg-GGGUCCagGAGUCUg -3' miRNA: 3'- -UCcCCGGAGAaaCCCGGGagUUCAGG- -5' |
|||||||
33468 | 3' | -58.1 | NC_007605.1 | + | 59606 | 0.7 | 0.606969 |
Target: 5'- uGGGcCCUCUUcuacGGCCC-CAGGUCCc -3' miRNA: 3'- uCCCcGGAGAAac--CCGGGaGUUCAGG- -5' |
|||||||
33468 | 3' | -58.1 | NC_007605.1 | + | 146520 | 0.71 | 0.567055 |
Target: 5'- gAGGGG-CUCUggGGuGCCCg-AGGUCCc -3' miRNA: 3'- -UCCCCgGAGAaaCC-CGGGagUUCAGG- -5' |
|||||||
33468 | 3' | -58.1 | NC_007605.1 | + | 143451 | 0.71 | 0.567055 |
Target: 5'- gAGGGG-CUCUggGGuGCCCg-AGGUCCc -3' miRNA: 3'- -UCCCCgGAGAaaCC-CGGGagUUCAGG- -5' |
|||||||
33468 | 3' | -58.1 | NC_007605.1 | + | 140382 | 0.71 | 0.567055 |
Target: 5'- gAGGGG-CUCUggGGuGCCCg-AGGUCCc -3' miRNA: 3'- -UCCCCgGAGAaaCC-CGGGagUUCAGG- -5' |
|||||||
33468 | 3' | -58.1 | NC_007605.1 | + | 137313 | 0.71 | 0.567055 |
Target: 5'- gAGGGG-CUCUggGGuGCCCg-AGGUCCc -3' miRNA: 3'- -UCCCCgGAGAaaCC-CGGGagUUCAGG- -5' |
|||||||
33468 | 3' | -58.1 | NC_007605.1 | + | 168682 | 0.71 | 0.537559 |
Target: 5'- uAGGGGCacggagGGGCCgUCA-GUCCg -3' miRNA: 3'- -UCCCCGgagaaaCCCGGgAGUuCAGG- -5' |
|||||||
33468 | 3' | -58.1 | NC_007605.1 | + | 160875 | 0.72 | 0.527842 |
Target: 5'- gGGGGGCaUCUggGGGCCCUUguuGGUa- -3' miRNA: 3'- -UCCCCGgAGAaaCCCGGGAGu--UCAgg -5' |
|||||||
33468 | 3' | -58.1 | NC_007605.1 | + | 110873 | 0.74 | 0.384054 |
Target: 5'- cGGGGGCCcCUggGGGCUgUCGucccacgacgcAGUCCu -3' miRNA: 3'- -UCCCCGGaGAaaCCCGGgAGU-----------UCAGG- -5' |
|||||||
33468 | 3' | -58.1 | NC_007605.1 | + | 168610 | 0.66 | 0.858217 |
Target: 5'- cGGGGCCggguacaGGGCCgagaacagCUCGAGggCCg -3' miRNA: 3'- uCCCCGGagaaa--CCCGG--------GAGUUCa-GG- -5' |
<< Previous Page | Next Page >>
Note:
When operating RNAhybrid, the pipeline first calculates the perfect minimum free energy (Perfect mfe *) of a putative miRNA when the entire putative miRNA binds to a perfectly complementary target site, then it calculates the minimum free energy of RNA duplex (mfe of the miRNA/mRNA duplex), abbreviated as Rd_mfe. An alignment for which the Rd_mfe to its correspondent Perfect mfe ratio (R_P_ratio #) is more than 66% is regarded as a positive alignment as described by Krek et al. (21). The P_value is calculated by RNAhybrid.
Back To miRNA display CGI home