Results 101 - 120 of 157 are showing below:
Show page:
<< Previous Page | Next Page >>
ID | Location | Perfect MFE.* | RefSeq Acc. | strand | Start Position | R_P_ratio# |
P value![]() |
Predicted miRNA align pattern | |||||||
33571 | 5' | -62.2 | NC_007605.1 | + | 142688 | 0.67 | 0.651307 |
Target: 5'- gGGugGacagaGGGCCugUccaCCGuGGGAGGGg -3' miRNA: 3'- -UCugCg----CCCGGugGca-GGC-CCCUUCC- -5' |
|||||||
33571 | 5' | -62.2 | NC_007605.1 | + | 165962 | 0.67 | 0.651307 |
Target: 5'- uGGGCGCGGGUCccccuagccCCGg-CGGGGAuccGGa -3' miRNA: 3'- -UCUGCGCCCGGu--------GGCagGCCCCUu--CC- -5' |
|||||||
33571 | 5' | -62.2 | NC_007605.1 | + | 138243 | 0.67 | 0.670464 |
Target: 5'- gGGACGgaggGGGCCugaaGcCCGGGGAcuAGGg -3' miRNA: 3'- -UCUGCg---CCCGGugg-CaGGCCCCU--UCC- -5' |
|||||||
33571 | 5' | -62.2 | NC_007605.1 | + | 147450 | 0.67 | 0.670464 |
Target: 5'- gGGACGgaggGGGCCugaaGcCCGGGGAcuAGGg -3' miRNA: 3'- -UCUGCg---CCCGGugg-CaGGCCCCU--UCC- -5' |
|||||||
33571 | 5' | -62.2 | NC_007605.1 | + | 153588 | 0.67 | 0.670464 |
Target: 5'- gGGACGgaggGGGCCugaaGcCCGGGGAcuAGGg -3' miRNA: 3'- -UCUGCg---CCCGGugg-CaGGCCCCU--UCC- -5' |
|||||||
33571 | 5' | -62.2 | NC_007605.1 | + | 144381 | 0.67 | 0.670464 |
Target: 5'- gGGACGgaggGGGCCugaaGcCCGGGGAcuAGGg -3' miRNA: 3'- -UCUGCg---CCCGGugg-CaGGCCCCU--UCC- -5' |
|||||||
33571 | 5' | -62.2 | NC_007605.1 | + | 141312 | 0.67 | 0.670464 |
Target: 5'- gGGACGgaggGGGCCugaaGcCCGGGGAcuAGGg -3' miRNA: 3'- -UCUGCg---CCCGGugg-CaGGCCCCU--UCC- -5' |
|||||||
33571 | 5' | -62.2 | NC_007605.1 | + | 150519 | 0.67 | 0.670464 |
Target: 5'- gGGACGgaggGGGCCugaaGcCCGGGGAcuAGGg -3' miRNA: 3'- -UCUGCg---CCCGGugg-CaGGCCCCU--UCC- -5' |
|||||||
33571 | 5' | -62.2 | NC_007605.1 | + | 77472 | 0.67 | 0.670464 |
Target: 5'- uGAcCGUGGGaaCCGCCGUCUuuuggccacuGGGGGccuGGGg -3' miRNA: 3'- uCU-GCGCCC--GGUGGCAGG----------CCCCU---UCC- -5' |
|||||||
33571 | 5' | -62.2 | NC_007605.1 | + | 97734 | 0.67 | 0.674284 |
Target: 5'- cAGA-GCcuGGCCGCCGUCaCgucccuggccgagcuGGGGGAGGu -3' miRNA: 3'- -UCUgCGc-CCGGUGGCAG-G---------------CCCCUUCC- -5' |
|||||||
33571 | 5' | -62.2 | NC_007605.1 | + | 143220 | 0.66 | 0.689512 |
Target: 5'- gGGACauccUGGGCUcuGaaGcCCGGGGAAGGg -3' miRNA: 3'- -UCUGc---GCCCGG--UggCaGGCCCCUUCC- -5' |
|||||||
33571 | 5' | -62.2 | NC_007605.1 | + | 149358 | 0.66 | 0.689512 |
Target: 5'- gGGACauccUGGGCUcuGaaGcCCGGGGAAGGg -3' miRNA: 3'- -UCUGc---GCCCGG--UggCaGGCCCCUUCC- -5' |
|||||||
33571 | 5' | -62.2 | NC_007605.1 | + | 171207 | 0.66 | 0.689512 |
Target: 5'- cGGugGauGGCgGCgGacguUCCGGGGAucGGGg -3' miRNA: 3'- -UCugCgcCCGgUGgC----AGGCCCCU--UCC- -5' |
|||||||
33571 | 5' | -62.2 | NC_007605.1 | + | 170147 | 0.66 | 0.689512 |
Target: 5'- cGGugGauGGCgGCgGacguUCCGGGGAucGGGg -3' miRNA: 3'- -UCugCgcCCGgUGgC----AGGCCCCU--UCC- -5' |
|||||||
33571 | 5' | -62.2 | NC_007605.1 | + | 169610 | 0.66 | 0.689512 |
Target: 5'- cGGugGauGGCgGCgGacguUCCGGGGAucGGGg -3' miRNA: 3'- -UCugCgcCCGgUGgC----AGGCCCCU--UCC- -5' |
|||||||
33571 | 5' | -62.2 | NC_007605.1 | + | 170669 | 0.66 | 0.689512 |
Target: 5'- cGGugGauGGCgGCgGacguUCCGGGGAucGGGg -3' miRNA: 3'- -UCugCgcCCGgUGgC----AGGCCCCU--UCC- -5' |
|||||||
33571 | 5' | -62.2 | NC_007605.1 | + | 137082 | 0.66 | 0.689512 |
Target: 5'- gGGACauccUGGGCUcuGaaGcCCGGGGAAGGg -3' miRNA: 3'- -UCUGc---GCCCGG--UggCaGGCCCCUUCC- -5' |
|||||||
33571 | 5' | -62.2 | NC_007605.1 | + | 140151 | 0.66 | 0.689512 |
Target: 5'- gGGACauccUGGGCUcuGaaGcCCGGGGAAGGg -3' miRNA: 3'- -UCUGc---GCCCGG--UggCaGGCCCCUUCC- -5' |
|||||||
33571 | 5' | -62.2 | NC_007605.1 | + | 146289 | 0.66 | 0.689512 |
Target: 5'- gGGACauccUGGGCUcuGaaGcCCGGGGAAGGg -3' miRNA: 3'- -UCUGc---GCCCGG--UggCaGGCCCCUUCC- -5' |
|||||||
33571 | 5' | -62.2 | NC_007605.1 | + | 160558 | 0.66 | 0.689512 |
Target: 5'- aGGGCGCugcaugcacGGUCauucuGCCGUCucaaaCGGGGAAGGa -3' miRNA: 3'- -UCUGCGc--------CCGG-----UGGCAG-----GCCCCUUCC- -5' |
<< Previous Page | Next Page >>
Note:
When operating RNAhybrid, the pipeline first calculates the perfect minimum free energy (Perfect mfe *) of a putative miRNA when the entire putative miRNA binds to a perfectly complementary target site, then it calculates the minimum free energy of RNA duplex (mfe of the miRNA/mRNA duplex), abbreviated as Rd_mfe. An alignment for which the Rd_mfe to its correspondent Perfect mfe ratio (R_P_ratio #) is more than 66% is regarded as a positive alignment as described by Krek et al. (21). The P_value is calculated by RNAhybrid.
Back To miRNA display CGI home