Results 81 - 100 of 294 are showing below:
Show page:
<< Previous Page | Next Page >>
ID | Location | Perfect MFE.* | RefSeq Acc. |
strand![]() |
Start Position | R_P_ratio# | P value |
Predicted miRNA align pattern | |||||||
33600 | 5' | -64.2 | NC_007605.1 | + | 20552 | 0.72 | 0.250147 |
Target: 5'- ----aCCUCUCCCuagCCCUccGCCCCCUCCa -3' miRNA: 3'- auuagGGAGGGGG---GGGA--UGGGGGGGG- -5' |
|||||||
33600 | 5' | -64.2 | NC_007605.1 | + | 22316 | 0.72 | 0.250147 |
Target: 5'- ---cCCCUCuCCUCCCCUccaggcccgaGCCUCUCCCu -3' miRNA: 3'- auuaGGGAG-GGGGGGGA----------UGGGGGGGG- -5' |
|||||||
33600 | 5' | -64.2 | NC_007605.1 | + | 23621 | 0.72 | 0.250147 |
Target: 5'- ----aCCUCUCCCuagCCCUccGCCCCCUCCa -3' miRNA: 3'- auuagGGAGGGGG---GGGA--UGGGGGGGG- -5' |
|||||||
33600 | 5' | -64.2 | NC_007605.1 | + | 25385 | 0.72 | 0.250147 |
Target: 5'- ---cCCCUCuCCUCCCCUccaggcccgaGCCUCUCCCu -3' miRNA: 3'- auuaGGGAG-GGGGGGGA----------UGGGGGGGG- -5' |
|||||||
33600 | 5' | -64.2 | NC_007605.1 | + | 26690 | 0.72 | 0.250147 |
Target: 5'- ----aCCUCUCCCuagCCCUccGCCCCCUCCa -3' miRNA: 3'- auuagGGAGGGGG---GGGA--UGGGGGGGG- -5' |
|||||||
33600 | 5' | -64.2 | NC_007605.1 | + | 28454 | 0.72 | 0.250147 |
Target: 5'- ---cCCCUCuCCUCCCCUccaggcccgaGCCUCUCCCu -3' miRNA: 3'- auuaGGGAG-GGGGGGGA----------UGGGGGGGG- -5' |
|||||||
33600 | 5' | -64.2 | NC_007605.1 | + | 29759 | 0.72 | 0.250147 |
Target: 5'- ----aCCUCUCCCuagCCCUccGCCCCCUCCa -3' miRNA: 3'- auuagGGAGGGGG---GGGA--UGGGGGGGG- -5' |
|||||||
33600 | 5' | -64.2 | NC_007605.1 | + | 14414 | 0.72 | 0.250147 |
Target: 5'- ----aCCUCUCCCuagCCCUccGCCCCCUCCa -3' miRNA: 3'- auuagGGAGGGGG---GGGA--UGGGGGGGG- -5' |
|||||||
33600 | 5' | -64.2 | NC_007605.1 | + | 13109 | 0.72 | 0.250147 |
Target: 5'- ---cCCCUCuCCUCCCCUccaggcccgaGCCUCUCCCu -3' miRNA: 3'- auuaGGGAG-GGGGGGGA----------UGGGGGGGG- -5' |
|||||||
33600 | 5' | -64.2 | NC_007605.1 | + | 59477 | 0.73 | 0.233666 |
Target: 5'- aGAUCugCCUCCCCUCCCU-CUCCCUCg -3' miRNA: 3'- aUUAG--GGAGGGGGGGGAuGGGGGGGg -5' |
|||||||
33600 | 5' | -64.2 | NC_007605.1 | + | 12067 | 0.74 | 0.18964 |
Target: 5'- ---cCCCUCCugCCaCCCCaGCCUCCCCCc -3' miRNA: 3'- auuaGGGAGG--GG-GGGGaUGGGGGGGG- -5' |
|||||||
33600 | 5' | -64.2 | NC_007605.1 | + | 75287 | 0.74 | 0.194147 |
Target: 5'- gGAUCCaaaccCCCUCCCCUGuCUCCCCUCg -3' miRNA: 3'- aUUAGGga---GGGGGGGGAU-GGGGGGGG- -5' |
|||||||
33600 | 5' | -64.2 | NC_007605.1 | + | 13728 | 0.73 | 0.223192 |
Target: 5'- aGGUgCCUCCagagCCCCUUUugCCCCCCUg -3' miRNA: 3'- aUUAgGGAGG----GGGGGGAugGGGGGGG- -5' |
|||||||
33600 | 5' | -64.2 | NC_007605.1 | + | 16797 | 0.73 | 0.223192 |
Target: 5'- aGGUgCCUCCagagCCCCUUUugCCCCCCUg -3' miRNA: 3'- aUUAgGGAGG----GGGGGGAugGGGGGGG- -5' |
|||||||
33600 | 5' | -64.2 | NC_007605.1 | + | 19866 | 0.73 | 0.223192 |
Target: 5'- aGGUgCCUCCagagCCCCUUUugCCCCCCUg -3' miRNA: 3'- aUUAgGGAGG----GGGGGGAugGGGGGGG- -5' |
|||||||
33600 | 5' | -64.2 | NC_007605.1 | + | 26003 | 0.73 | 0.223192 |
Target: 5'- aGGUgCCUCCagagCCCCUUUugCCCCCCUg -3' miRNA: 3'- aUUAgGGAGG----GGGGGGAugGGGGGGG- -5' |
|||||||
33600 | 5' | -64.2 | NC_007605.1 | + | 29072 | 0.73 | 0.223192 |
Target: 5'- aGGUgCCUCCagagCCCCUUUugCCCCCCUg -3' miRNA: 3'- aUUAgGGAGG----GGGGGGAugGGGGGGG- -5' |
|||||||
33600 | 5' | -64.2 | NC_007605.1 | + | 32141 | 0.73 | 0.223192 |
Target: 5'- aGGUgCCUCCagagCCCCUUUugCCCCCCUg -3' miRNA: 3'- aUUAgGGAGG----GGGGGGAugGGGGGGG- -5' |
|||||||
33600 | 5' | -64.2 | NC_007605.1 | + | 35210 | 0.73 | 0.223192 |
Target: 5'- aGGUgCCUCCagagCCCCUUUugCCCCCCUg -3' miRNA: 3'- aUUAgGGAGG----GGGGGGAugGGGGGGG- -5' |
|||||||
33600 | 5' | -64.2 | NC_007605.1 | + | 31523 | 0.72 | 0.250147 |
Target: 5'- ---cCCCUCuCCUCCCCUccaggcccgaGCCUCUCCCu -3' miRNA: 3'- auuaGGGAG-GGGGGGGA----------UGGGGGGGG- -5' |
<< Previous Page | Next Page >>
Note:
When operating RNAhybrid, the pipeline first calculates the perfect minimum free energy (Perfect mfe *) of a putative miRNA when the entire putative miRNA binds to a perfectly complementary target site, then it calculates the minimum free energy of RNA duplex (mfe of the miRNA/mRNA duplex), abbreviated as Rd_mfe. An alignment for which the Rd_mfe to its correspondent Perfect mfe ratio (R_P_ratio #) is more than 66% is regarded as a positive alignment as described by Krek et al. (21). The P_value is calculated by RNAhybrid.
Back To miRNA display CGI home