Results 101 - 114 of 114 are showing below:
Show page:
<< Previous Page | Next Page >>
ID | Location | Perfect MFE.* | RefSeq Acc. | strand | Start Position | R_P_ratio# | P value |
Predicted miRNA align pattern | |||||||
33610 | 3' | -58.6 | NC_007605.1 | + | 38423 | 0.66 | 0.831143 |
Target: 5'- cCGGGcgGcCGCCgGUGGgucCGCUgGGCCg -3' miRNA: 3'- cGUCCuaC-GCGGaUAUC---GCGGgCCGG- -5' |
|||||||
33610 | 3' | -58.6 | NC_007605.1 | + | 38298 | 0.66 | 0.831143 |
Target: 5'- cCGGGcgGcCGCCgGUGGgucCGCUgGGCCg -3' miRNA: 3'- cGUCCuaC-GCGGaUAUC---GCGGgCCGG- -5' |
|||||||
33610 | 3' | -58.6 | NC_007605.1 | + | 39672 | 0.66 | 0.831143 |
Target: 5'- cCGGGcgGcCGCCgGUGGgucCGCUgGGCCg -3' miRNA: 3'- cGUCCuaC-GCGGaUAUC---GCGGgCCGG- -5' |
|||||||
33610 | 3' | -58.6 | NC_007605.1 | + | 40214 | 0.66 | 0.838415 |
Target: 5'- gGCAGGggGUccccauggcacagGCCUAgggguccagggGGCaGCCgCGGCCc -3' miRNA: 3'- -CGUCCuaCG-------------CGGAUa----------UCG-CGG-GCCGG- -5' |
|||||||
33610 | 3' | -58.6 | NC_007605.1 | + | 170184 | 0.66 | 0.839214 |
Target: 5'- uCGGGggGCGCCgcgcgGGCGCa--GCCa -3' miRNA: 3'- cGUCCuaCGCGGaua--UCGCGggcCGG- -5' |
|||||||
33610 | 3' | -58.6 | NC_007605.1 | + | 170706 | 0.66 | 0.839214 |
Target: 5'- uCGGGggGCGCCgcgcgGGCGCa--GCCa -3' miRNA: 3'- cGUCCuaCGCGGaua--UCGCGggcCGG- -5' |
|||||||
33610 | 3' | -58.6 | NC_007605.1 | + | 171244 | 0.66 | 0.839214 |
Target: 5'- uCGGGggGCGCCgcgcgGGCGCa--GCCa -3' miRNA: 3'- cGUCCuaCGCGGaua--UCGCGggcCGG- -5' |
|||||||
33610 | 3' | -58.6 | NC_007605.1 | + | 35164 | 0.66 | 0.839214 |
Target: 5'- cGUAGGAagGCGCg-GUGGCuauuGCCUGGUg -3' miRNA: 3'- -CGUCCUa-CGCGgaUAUCG----CGGGCCGg -5' |
|||||||
33610 | 3' | -58.6 | NC_007605.1 | + | 136862 | 0.66 | 0.839214 |
Target: 5'- aCAGGcccUGCGCCgggAGaCGCUguccuaCGGCCa -3' miRNA: 3'- cGUCCu--ACGCGGauaUC-GCGG------GCCGG- -5' |
|||||||
33610 | 3' | -58.6 | NC_007605.1 | + | 167261 | 0.66 | 0.847105 |
Target: 5'- cGCAGGG-GCGUUgGUGGCggaGUCUGGCa -3' miRNA: 3'- -CGUCCUaCGCGGaUAUCG---CGGGCCGg -5' |
|||||||
33610 | 3' | -58.6 | NC_007605.1 | + | 65501 | 0.66 | 0.847105 |
Target: 5'- cCAGGGauauggccuccaUGgGCCUcgggGUgcAGgGCCUGGCCg -3' miRNA: 3'- cGUCCU------------ACgCGGA----UA--UCgCGGGCCGG- -5' |
|||||||
33610 | 3' | -58.6 | NC_007605.1 | + | 63324 | 0.66 | 0.847105 |
Target: 5'- gGCAGGuggGgGCCUGacGCGgaUGGCCa -3' miRNA: 3'- -CGUCCua-CgCGGAUauCGCggGCCGG- -5' |
|||||||
33610 | 3' | -58.6 | NC_007605.1 | + | 50527 | 0.66 | 0.847105 |
Target: 5'- -gGGGuGUGCGCCgg-GGCGgCCaaGCCg -3' miRNA: 3'- cgUCC-UACGCGGauaUCGC-GGgcCGG- -5' |
|||||||
33610 | 3' | -58.6 | NC_007605.1 | + | 111511 | 0.66 | 0.847105 |
Target: 5'- aGCuGGGAUacaGCCUGacgGGCGCCCucaGGCg -3' miRNA: 3'- -CG-UCCUAcg-CGGAUa--UCGCGGG---CCGg -5' |
<< Previous Page | Next Page >>
Note:
When operating RNAhybrid, the pipeline first calculates the perfect minimum free energy (Perfect mfe *) of a putative miRNA when the entire putative miRNA binds to a perfectly complementary target site, then it calculates the minimum free energy of RNA duplex (mfe of the miRNA/mRNA duplex), abbreviated as Rd_mfe. An alignment for which the Rd_mfe to its correspondent Perfect mfe ratio (R_P_ratio #) is more than 66% is regarded as a positive alignment as described by Krek et al. (21). The P_value is calculated by RNAhybrid.
Back To miRNA display CGI home