Results 81 - 100 of 309 are showing below:
Show page:
<< Previous Page | Next Page >>
ID | Location | Perfect MFE.* | RefSeq Acc. |
strand![]() |
Start Position | R_P_ratio# | P value |
Predicted miRNA align pattern | |||||||
33625 | 5' | -66.2 | NC_007605.1 | + | 30108 | 0.72 | 0.206025 |
Target: 5'- aGgGCCggaaccccggaCCCGGCUGCaGCCGGCCAccccccgccggAGCg -3' miRNA: 3'- gCgCGG-----------GGGCCGGCG-CGGUCGGU-----------UCG- -5' |
|||||||
33625 | 5' | -66.2 | NC_007605.1 | + | 30618 | 0.72 | 0.206025 |
Target: 5'- aGgGCCggaaccccggaCCCGGCUGCaGCCGGCCAccccccgccggAGCg -3' miRNA: 3'- gCgCGG-----------GGGCCGGCG-CGGUCGGU-----------UCG- -5' |
|||||||
33625 | 5' | -66.2 | NC_007605.1 | + | 79910 | 0.72 | 0.206025 |
Target: 5'- gCGgGCCCCaaaGUCGCGCCGGacauCCAGGCc -3' miRNA: 3'- -GCgCGGGGgc-CGGCGCGGUC----GGUUCG- -5' |
|||||||
33625 | 5' | -66.2 | NC_007605.1 | + | 132105 | 0.71 | 0.230878 |
Target: 5'- gGCuGCCCCCGGa-GCGCCAGgaacCCcGGCu -3' miRNA: 3'- gCG-CGGGGGCCggCGCGGUC----GGuUCG- -5' |
|||||||
33625 | 5' | -66.2 | NC_007605.1 | + | 132480 | 0.71 | 0.230878 |
Target: 5'- gGCuGCCCCCGGa-GCGCCAGgaacCCcGGCu -3' miRNA: 3'- gCG-CGGGGGCCggCGCGGUC----GGuUCG- -5' |
|||||||
33625 | 5' | -66.2 | NC_007605.1 | + | 30997 | 0.71 | 0.236143 |
Target: 5'- uGgGCCaCCCGGCCGC-CC--CCGAGCu -3' miRNA: 3'- gCgCGG-GGGCCGGCGcGGucGGUUCG- -5' |
|||||||
33625 | 5' | -66.2 | NC_007605.1 | + | 109592 | 0.71 | 0.258213 |
Target: 5'- uCGCuGCCCCUGGCC-CGgCGG-CGGGCg -3' miRNA: 3'- -GCG-CGGGGGCCGGcGCgGUCgGUUCG- -5' |
|||||||
33625 | 5' | -66.2 | NC_007605.1 | + | 30924 | 0.72 | 0.201341 |
Target: 5'- aGgGCCggaaccccgaCCCGGCUGCaGCCGGCCAccccccgccggAGCg -3' miRNA: 3'- gCgCGG----------GGGCCGGCG-CGGUCGGU-----------UCG- -5' |
|||||||
33625 | 5' | -66.2 | NC_007605.1 | + | 30896 | 0.73 | 0.19225 |
Target: 5'- uGgGCCaCCCGGCCGC-CCc-CCGAGCu -3' miRNA: 3'- gCgCGG-GGGCCGGCGcGGucGGUUCG- -5' |
|||||||
33625 | 5' | -66.2 | NC_007605.1 | + | 30488 | 0.73 | 0.19225 |
Target: 5'- uGgGCCaCCCGGCCGC-CCc-CCGAGCu -3' miRNA: 3'- gCgCGG-GGGCCGGCGcGGucGGUUCG- -5' |
|||||||
33625 | 5' | -66.2 | NC_007605.1 | + | 118207 | 0.68 | 0.355984 |
Target: 5'- gGgGCCacaCCGacCCGCGCCAGCuCAAGa -3' miRNA: 3'- gCgCGGg--GGCc-GGCGCGGUCG-GUUCg -5' |
|||||||
33625 | 5' | -66.2 | NC_007605.1 | + | 142525 | 0.68 | 0.370834 |
Target: 5'- gGCGCCCggggguCgGGCUGgGCC-GCCAGGg -3' miRNA: 3'- gCGCGGG------GgCCGGCgCGGuCGGUUCg -5' |
|||||||
33625 | 5' | -66.2 | NC_007605.1 | + | 151731 | 0.68 | 0.370834 |
Target: 5'- gGCGCCCggggguCgGGCUGgGCC-GCCAGGg -3' miRNA: 3'- gCGCGGG------GgCCGGCgCGGuCGGUUCg -5' |
|||||||
33625 | 5' | -66.2 | NC_007605.1 | + | 35077 | 0.68 | 0.386101 |
Target: 5'- cCGgGUCCCC-GCC-CGCgGGCCcGGCg -3' miRNA: 3'- -GCgCGGGGGcCGGcGCGgUCGGuUCG- -5' |
|||||||
33625 | 5' | -66.2 | NC_007605.1 | + | 1524 | 0.68 | 0.386101 |
Target: 5'- cCGCGgaccccgaCCCCCcGCCGCccGCCcGCCGuAGCg -3' miRNA: 3'- -GCGC--------GGGGGcCGGCG--CGGuCGGU-UCG- -5' |
|||||||
33625 | 5' | -66.2 | NC_007605.1 | + | 28654 | 0.73 | 0.19225 |
Target: 5'- uGgGCCaCCCGGCCGC-CCc-CCGAGCu -3' miRNA: 3'- gCgCGG-GGGCCGGCGcGGucGGUUCG- -5' |
|||||||
33625 | 5' | -66.2 | NC_007605.1 | + | 28959 | 0.73 | 0.19225 |
Target: 5'- uGgGCCaCCCGGCCGC-CCc-CCGAGCu -3' miRNA: 3'- gCgCGG-GGGCCGGCGcGGucGGUUCG- -5' |
|||||||
33625 | 5' | -66.2 | NC_007605.1 | + | 29367 | 0.73 | 0.19225 |
Target: 5'- uGgGCCaCCCGGCCGC-CCc-CCGAGCu -3' miRNA: 3'- gCgCGG-GGGCCGGCGcGGucGGUUCG- -5' |
|||||||
33625 | 5' | -66.2 | NC_007605.1 | + | 29673 | 0.73 | 0.19225 |
Target: 5'- uGgGCCaCCCGGCCGC-CCc-CCGAGCu -3' miRNA: 3'- gCgCGG-GGGCCGGCGcGGucGGUUCG- -5' |
|||||||
33625 | 5' | -66.2 | NC_007605.1 | + | 30182 | 0.73 | 0.19225 |
Target: 5'- uGgGCCaCCCGGCCGC-CCc-CCGAGCu -3' miRNA: 3'- gCgCGG-GGGCCGGCGcGGucGGUUCG- -5' |
<< Previous Page | Next Page >>
Note:
When operating RNAhybrid, the pipeline first calculates the perfect minimum free energy (Perfect mfe *) of a putative miRNA when the entire putative miRNA binds to a perfectly complementary target site, then it calculates the minimum free energy of RNA duplex (mfe of the miRNA/mRNA duplex), abbreviated as Rd_mfe. An alignment for which the Rd_mfe to its correspondent Perfect mfe ratio (R_P_ratio #) is more than 66% is regarded as a positive alignment as described by Krek et al. (21). The P_value is calculated by RNAhybrid.
Back To miRNA display CGI home