Results 81 - 86 of 86 are showing below:
Show page:
<< Previous Page | Next Page >>
| ID | Location | Perfect MFE.* | RefSeq Acc. |
strand
|
Start Position | R_P_ratio# | P value |
| Predicted miRNA align pattern | |||||||
| 3591 | 5' | -54 | NC_001650.1 | + | 107314 | 0.67 | 0.939857 |
|
Target: 5'- uUCUG-CAGCAGGucccccacggagACCCccgggGGCAGCcCCa -3' miRNA: 3'- gAGACuGUUGUCU------------UGGG-----CCGUCGaGG- -5' |
|||||||
| 3591 | 5' | -54 | NC_001650.1 | + | 97728 | 0.67 | 0.939857 |
|
Target: 5'- aUCUGGC--CGGucGCCCugcaGCAGCUCCu -3' miRNA: 3'- gAGACUGuuGUCu-UGGGc---CGUCGAGG- -5' |
|||||||
| 3591 | 5' | -54 | NC_001650.1 | + | 151448 | 0.67 | 0.948803 |
|
Target: 5'- gCUCUGGCu-CAGGuucaaGCuCUGGUucaGGCUCCg -3' miRNA: 3'- -GAGACUGuuGUCU-----UG-GGCCG---UCGAGG- -5' |
|||||||
| 3591 | 5' | -54 | NC_001650.1 | + | 151490 | 0.67 | 0.948803 |
|
Target: 5'- gCUCUGGCu-CAGGuucaaGCuCUGGUucaGGCUCCg -3' miRNA: 3'- -GAGACUGuuGUCU-----UG-GGCCG---UCGAGG- -5' |
|||||||
| 3591 | 5' | -54 | NC_001650.1 | + | 151532 | 0.67 | 0.948803 |
|
Target: 5'- gCUCUGGCu-CAGGuucaaGCuCUGGUucaGGCUCCg -3' miRNA: 3'- -GAGACUGuuGUCU-----UG-GGCCG---UCGAGG- -5' |
|||||||
| 3591 | 5' | -54 | NC_001650.1 | + | 79196 | 0.66 | 0.975619 |
|
Target: 5'- aUCgGGCGcuGgAGGACCCGGgGGCUg- -3' miRNA: 3'- gAGaCUGU--UgUCUUGGGCCgUCGAgg -5' |
|||||||
<< Previous Page | Next Page >>
Note:
When operating RNAhybrid, the pipeline first calculates the perfect minimum free energy (Perfect mfe *) of a putative miRNA when the entire putative miRNA binds to a perfectly complementary target site, then it calculates the minimum free energy of RNA duplex (mfe of the miRNA/mRNA duplex), abbreviated as Rd_mfe. An alignment for which the Rd_mfe to its correspondent Perfect mfe ratio (R_P_ratio #) is more than 66% is regarded as a positive alignment as described by Krek et al. (21). The P_value is calculated by RNAhybrid.
Back To miRNA display CGI home