Results 41 - 60 of 226 are showing below:
Show page:
<< Previous Page | Next Page >>
ID | Location | Perfect MFE.* | RefSeq Acc. | strand | Start Position | R_P_ratio# | P value |
Predicted miRNA align pattern | |||||||
4297 | 5' | -56.7 | NC_001716.2 | + | 152042 | 0.7 | 0.679047 |
Target: 5'- gGUUAGGGU--UAGaCUUAGGGUUAGGg -3' miRNA: 3'- -CAAUCCCGgcGUCgGGAUCCCAAUCC- -5' |
|||||||
4297 | 5' | -56.7 | NC_001716.2 | + | 151982 | 0.7 | 0.679047 |
Target: 5'- gGUUAGGGU--UAGaCUUAGGGUUAGGg -3' miRNA: 3'- -CAAUCCCGgcGUCgGGAUCCCAAUCC- -5' |
|||||||
4297 | 5' | -56.7 | NC_001716.2 | + | 151916 | 0.7 | 0.679047 |
Target: 5'- gGUUAGGGU--UAGaCUUAGGGUUAGGg -3' miRNA: 3'- -CAAUCCCGgcGUCgGGAUCCCAAUCC- -5' |
|||||||
4297 | 5' | -56.7 | NC_001716.2 | + | 151862 | 0.7 | 0.679047 |
Target: 5'- gGUUAGGGU--UAGaCUUAGGGUUAGGg -3' miRNA: 3'- -CAAUCCCGgcGUCgGGAUCCCAAUCC- -5' |
|||||||
4297 | 5' | -56.7 | NC_001716.2 | + | 7918 | 0.7 | 0.658676 |
Target: 5'- gGUUAGGGuuGgGGUgaaacuuagagCUAGGGUUAGGg -3' miRNA: 3'- -CAAUCCCggCgUCGg----------GAUCCCAAUCC- -5' |
|||||||
4297 | 5' | -56.7 | NC_001716.2 | + | 7882 | 0.7 | 0.658676 |
Target: 5'- gGUUAGGGuuGgGGUgaaacuuagagCUAGGGUUAGGg -3' miRNA: 3'- -CAAUCCCggCgUCGg----------GAUCCCAAUCC- -5' |
|||||||
4297 | 5' | -56.7 | NC_001716.2 | + | 6839 | 0.7 | 0.658676 |
Target: 5'- gGUUAGGGuuGgGGUgaaacuuagagCUAGGGUUAGGg -3' miRNA: 3'- -CAAUCCCggCgUCGg----------GAUCCCAAUCC- -5' |
|||||||
4297 | 5' | -56.7 | NC_001716.2 | + | 6113 | 0.7 | 0.658676 |
Target: 5'- gGUUAGGGuuGgGGUgaaacuuagagCUAGGGUUAGGg -3' miRNA: 3'- -CAAUCCCggCgUCGg----------GAUCCCAAUCC- -5' |
|||||||
4297 | 5' | -56.7 | NC_001716.2 | + | 8600 | 0.7 | 0.658676 |
Target: 5'- gGUUAGGGuuGgGGUgaaacuuagagCUAGGGUUAGGg -3' miRNA: 3'- -CAAUCCCggCgUCGg----------GAUCCCAAUCC- -5' |
|||||||
4297 | 5' | -56.7 | NC_001716.2 | + | 9541 | 0.7 | 0.658676 |
Target: 5'- aGUUAGGGU--UAGaCUUAGGGUUAGGg -3' miRNA: 3'- -CAAUCCCGgcGUCgGGAUCCCAAUCC- -5' |
|||||||
4297 | 5' | -56.7 | NC_001716.2 | + | 149016 | 0.7 | 0.658676 |
Target: 5'- gGUUAGGGuuGgGGUgaaacuuagagCUAGGGUUAGGg -3' miRNA: 3'- -CAAUCCCggCgUCGg----------GAUCCCAAUCC- -5' |
|||||||
4297 | 5' | -56.7 | NC_001716.2 | + | 149741 | 0.7 | 0.658676 |
Target: 5'- gGUUAGGGuuGgGGUgaaacuuagagCUAGGGUUAGGg -3' miRNA: 3'- -CAAUCCCggCgUCGg----------GAUCCCAAUCC- -5' |
|||||||
4297 | 5' | -56.7 | NC_001716.2 | + | 150784 | 0.7 | 0.658676 |
Target: 5'- gGUUAGGGuuGgGGUgaaacuuagagCUAGGGUUAGGg -3' miRNA: 3'- -CAAUCCCggCgUCGg----------GAUCCCAAUCC- -5' |
|||||||
4297 | 5' | -56.7 | NC_001716.2 | + | 151503 | 0.7 | 0.658676 |
Target: 5'- gGUUAGGGuuGgGGUgaaacuuagagCUAGGGUUAGGg -3' miRNA: 3'- -CAAUCCCggCgUCGg----------GAUCCCAAUCC- -5' |
|||||||
4297 | 5' | -56.7 | NC_001716.2 | + | 152444 | 0.7 | 0.658676 |
Target: 5'- aGUUAGGGU--UAGaCUUAGGGUUAGGg -3' miRNA: 3'- -CAAUCCCGgcGUCgGGAUCCCAAUCC- -5' |
|||||||
4297 | 5' | -56.7 | NC_001716.2 | + | 9859 | 0.7 | 0.638219 |
Target: 5'- gGUUAGGGUCaggguUAGaCUUAGGGUUAGGg -3' miRNA: 3'- -CAAUCCCGGc----GUCgGGAUCCCAAUCC- -5' |
|||||||
4297 | 5' | -56.7 | NC_001716.2 | + | 152761 | 0.7 | 0.638219 |
Target: 5'- gGUUAGGGUCaggguUAGaCUUAGGGUUAGGg -3' miRNA: 3'- -CAAUCCCGGc----GUCgGGAUCCCAAUCC- -5' |
|||||||
4297 | 5' | -56.7 | NC_001716.2 | + | 143815 | 0.71 | 0.607517 |
Target: 5'- gGUUAGGGU--UAGgCUUAGGGUUAGGc -3' miRNA: 3'- -CAAUCCCGgcGUCgGGAUCCCAAUCC- -5' |
|||||||
4297 | 5' | -56.7 | NC_001716.2 | + | 913 | 0.71 | 0.607517 |
Target: 5'- gGUUAGGGU--UAGgCUUAGGGUUAGGc -3' miRNA: 3'- -CAAUCCCGgcGUCgGGAUCCCAAUCC- -5' |
|||||||
4297 | 5' | -56.7 | NC_001716.2 | + | 8888 | 0.73 | 0.478632 |
Target: 5'- gGUUAGGGuuGgGGUUagggUUAGGGUUAGGg -3' miRNA: 3'- -CAAUCCCggCgUCGG----GAUCCCAAUCC- -5' |
<< Previous Page | Next Page >>
Note:
When operating RNAhybrid, the pipeline first calculates the perfect minimum free energy (Perfect mfe *) of a putative miRNA when the entire putative miRNA binds to a perfectly complementary target site, then it calculates the minimum free energy of RNA duplex (mfe of the miRNA/mRNA duplex), abbreviated as Rd_mfe. An alignment for which the Rd_mfe to its correspondent Perfect mfe ratio (R_P_ratio #) is more than 66% is regarded as a positive alignment as described by Krek et al. (21). The P_value is calculated by RNAhybrid.
Back To miRNA display CGI home