Results 81 - 84 of 84 are showing below:
Show page:
<< Previous Page | Next Page >>
ID | Location | Perfect MFE.* | RefSeq Acc. | strand | Start Position | R_P_ratio# | P value |
Predicted miRNA align pattern | |||||||
5204 | 5' | -60.5 | NC_001798.1 | + | 2795 | 0.71 | 0.429195 |
Target: 5'- gCGCGGgcUCCGCGGCagcgCCGGGCCCa---- -3' miRNA: 3'- -GCGUC--AGGCGUUG----GGCCCGGGaguag -5' |
|||||||
5204 | 5' | -60.5 | NC_001798.1 | + | 2449 | 0.66 | 0.726395 |
Target: 5'- gGCGGcgCCaGCcGCCCugcgggucgGGGCCCUCGg- -3' miRNA: 3'- gCGUCa-GG-CGuUGGG---------CCCGGGAGUag -5' |
|||||||
5204 | 5' | -60.5 | NC_001798.1 | + | 2115 | 0.71 | 0.412102 |
Target: 5'- gCGCGGcCCGCGGCCa-GGUCCUCGc- -3' miRNA: 3'- -GCGUCaGGCGUUGGgcCCGGGAGUag -5' |
|||||||
5204 | 5' | -60.5 | NC_001798.1 | + | 1993 | 0.68 | 0.595339 |
Target: 5'- gCGCGGUCCaguugcccgcccagGCGGCCguggCGGGCCCgCAg- -3' miRNA: 3'- -GCGUCAGG--------------CGUUGG----GCCCGGGaGUag -5' |
<< Previous Page | Next Page >>
Note:
When operating RNAhybrid, the pipeline first calculates the perfect minimum free energy (Perfect mfe *) of a putative miRNA when the entire putative miRNA binds to a perfectly complementary target site, then it calculates the minimum free energy of RNA duplex (mfe of the miRNA/mRNA duplex), abbreviated as Rd_mfe. An alignment for which the Rd_mfe to its correspondent Perfect mfe ratio (R_P_ratio #) is more than 66% is regarded as a positive alignment as described by Krek et al. (21). The P_value is calculated by RNAhybrid.
Back To miRNA display CGI home