Results 101 - 120 of 187 are showing below:
Show page:
<< Previous Page | Next Page >>
ID | Location | Perfect MFE.* | RefSeq Acc. |
strand![]() |
Start Position | R_P_ratio# | P value |
Predicted miRNA align pattern | |||||||
5312 | 3' | -56 | NC_001798.1 | + | 45069 | 0.67 | 0.881596 |
Target: 5'- uCGCUGGA--CGACACC-CGgcgCCUCGu -3' miRNA: 3'- cGCGGCCUucGUUGUGGuGCa--GGAGC- -5' |
|||||||
5312 | 3' | -56 | NC_001798.1 | + | 31688 | 0.67 | 0.881596 |
Target: 5'- cGUGCCGGuGGacgcGCACCGCGcgCCcCGg -3' miRNA: 3'- -CGCGGCCuUCgu--UGUGGUGCa-GGaGC- -5' |
|||||||
5312 | 3' | -56 | NC_001798.1 | + | 3785 | 0.67 | 0.881596 |
Target: 5'- gGCGCCGGG----GCGCC-CGaggCCUCGa -3' miRNA: 3'- -CGCGGCCUucguUGUGGuGCa--GGAGC- -5' |
|||||||
5312 | 3' | -56 | NC_001798.1 | + | 3259 | 0.67 | 0.881596 |
Target: 5'- gGCGCCGu-AGCcggcgGGCACCGCG-CgCUCGu -3' miRNA: 3'- -CGCGGCcuUCG-----UUGUGGUGCaG-GAGC- -5' |
|||||||
5312 | 3' | -56 | NC_001798.1 | + | 19301 | 0.67 | 0.881596 |
Target: 5'- gGCGaCCGGGAacGCAGCugucuucgcugGCUACGgucCCUCGu -3' miRNA: 3'- -CGC-GGCCUU--CGUUG-----------UGGUGCa--GGAGC- -5' |
|||||||
5312 | 3' | -56 | NC_001798.1 | + | 80719 | 0.67 | 0.895072 |
Target: 5'- gGCGCUcc--GCAACACCACGgCCUUc -3' miRNA: 3'- -CGCGGccuuCGUUGUGGUGCaGGAGc -5' |
|||||||
5312 | 3' | -56 | NC_001798.1 | + | 154046 | 0.67 | 0.895072 |
Target: 5'- cGCGCCGGGGcGCGGCACgGCuGgagcgCCggggCGc -3' miRNA: 3'- -CGCGGCCUU-CGUUGUGgUG-Ca----GGa---GC- -5' |
|||||||
5312 | 3' | -56 | NC_001798.1 | + | 52499 | 0.66 | 0.907648 |
Target: 5'- cGCGCCGGcgcaGGGaCGACGCgGCGgCCgcgCGc -3' miRNA: 3'- -CGCGGCC----UUC-GUUGUGgUGCaGGa--GC- -5' |
|||||||
5312 | 3' | -56 | NC_001798.1 | + | 19985 | 0.66 | 0.907648 |
Target: 5'- cCGCCGGAcGCGGauuCCGgGUUCUCc -3' miRNA: 3'- cGCGGCCUuCGUUgu-GGUgCAGGAGc -5' |
|||||||
5312 | 3' | -56 | NC_001798.1 | + | 152093 | 0.66 | 0.907648 |
Target: 5'- cGgGCCGGggGuCGGCcCCgucaaGCGUCCcCGc -3' miRNA: 3'- -CgCGGCCuuC-GUUGuGG-----UGCAGGaGC- -5' |
|||||||
5312 | 3' | -56 | NC_001798.1 | + | 116506 | 0.66 | 0.907648 |
Target: 5'- gGUGCCGGccuucucgcggGGGCGcugcuGCACCGCGgggguccgCUUCGa -3' miRNA: 3'- -CGCGGCC-----------UUCGU-----UGUGGUGCa-------GGAGC- -5' |
|||||||
5312 | 3' | -56 | NC_001798.1 | + | 109370 | 0.66 | 0.907648 |
Target: 5'- cCGCCcgGGGAGCAgcggGCugCGCGgccgaCUCGg -3' miRNA: 3'- cGCGG--CCUUCGU----UGugGUGCag---GAGC- -5' |
|||||||
5312 | 3' | -56 | NC_001798.1 | + | 1712 | 0.66 | 0.907648 |
Target: 5'- cGCgGCCGGAGGcCAGCACggugcggcgCAgGUCC-CGc -3' miRNA: 3'- -CG-CGGCCUUC-GUUGUG---------GUgCAGGaGC- -5' |
|||||||
5312 | 3' | -56 | NC_001798.1 | + | 15210 | 0.66 | 0.907648 |
Target: 5'- -aGCCGGggGgAGCGuCCGCGggUCCgugUGg -3' miRNA: 3'- cgCGGCCuuCgUUGU-GGUGC--AGGa--GC- -5' |
|||||||
5312 | 3' | -56 | NC_001798.1 | + | 111001 | 0.66 | 0.901474 |
Target: 5'- gGCGCgCGGuauGCGugGCCGCGgCCa-- -3' miRNA: 3'- -CGCG-GCCuu-CGUugUGGUGCaGGagc -5' |
|||||||
5312 | 3' | -56 | NC_001798.1 | + | 4215 | 0.66 | 0.901474 |
Target: 5'- gGCGCuggCGGggGCGcGgGCgGCGUCgUCGu -3' miRNA: 3'- -CGCG---GCCuuCGU-UgUGgUGCAGgAGC- -5' |
|||||||
5312 | 3' | -56 | NC_001798.1 | + | 135335 | 0.66 | 0.901474 |
Target: 5'- gGUGCCGGAcgcguGCGACGCCugccccGCGcUCCg-- -3' miRNA: 3'- -CGCGGCCUu----CGUUGUGG------UGC-AGGagc -5' |
|||||||
5312 | 3' | -56 | NC_001798.1 | + | 70343 | 0.66 | 0.901474 |
Target: 5'- cGUGCUGGcacccgcuccugGAGCAACugUGCG-CCUUGc -3' miRNA: 3'- -CGCGGCC------------UUCGUUGugGUGCaGGAGC- -5' |
|||||||
5312 | 3' | -56 | NC_001798.1 | + | 97607 | 0.66 | 0.900844 |
Target: 5'- gGgGCCGGAgagcuggGGCGACAUCGCGacgcgggCCgccgCGg -3' miRNA: 3'- -CgCGGCCU-------UCGUUGUGGUGCa------GGa---GC- -5' |
|||||||
5312 | 3' | -56 | NC_001798.1 | + | 51703 | 0.66 | 0.900844 |
Target: 5'- gGCGCUGGccugguacgucacGGGCGACGCgA--UCCUCGa -3' miRNA: 3'- -CGCGGCC-------------UUCGUUGUGgUgcAGGAGC- -5' |
<< Previous Page | Next Page >>
Note:
When operating RNAhybrid, the pipeline first calculates the perfect minimum free energy (Perfect mfe *) of a putative miRNA when the entire putative miRNA binds to a perfectly complementary target site, then it calculates the minimum free energy of RNA duplex (mfe of the miRNA/mRNA duplex), abbreviated as Rd_mfe. An alignment for which the Rd_mfe to its correspondent Perfect mfe ratio (R_P_ratio #) is more than 66% is regarded as a positive alignment as described by Krek et al. (21). The P_value is calculated by RNAhybrid.
Back To miRNA display CGI home