Results 61 - 66 of 66 are showing below:
Show page:
<< Previous Page | Next Page >>
| ID | Location | Perfect MFE.* | RefSeq Acc. | strand | Start Position |
R_P_ratio #
|
P value |
| Predicted miRNA align pattern | |||||||
| 5324 | 3' | -57 | NC_001798.1 | + | 29092 | 0.66 | 0.870986 |
|
Target: 5'- gCGGGcGAGgcGGGGGcGGCUGAgG-UCa -3' miRNA: 3'- -GCCC-CUCauCCCCC-UCGAUUgUgAGc -5' |
|||||||
| 5324 | 3' | -57 | NC_001798.1 | + | 123697 | 0.66 | 0.870986 |
|
Target: 5'- gCGGGGGucGGGcGGGGGUcgGGCACUa- -3' miRNA: 3'- -GCCCCUcaUCC-CCCUCGa-UUGUGAgc -5' |
|||||||
| 5324 | 3' | -57 | NC_001798.1 | + | 87562 | 0.66 | 0.870986 |
|
Target: 5'- aGGGGGG-AGGaGGGGGCgggggGACAgcCUgGg -3' miRNA: 3'- gCCCCUCaUCC-CCCUCGa----UUGU--GAgC- -5' |
|||||||
| 5324 | 3' | -57 | NC_001798.1 | + | 141701 | 0.66 | 0.863621 |
|
Target: 5'- cCGGGGGGaugcgcAGGGGGAGagcgUACUUGc -3' miRNA: 3'- -GCCCCUCa-----UCCCCCUCgauuGUGAGC- -5' |
|||||||
| 5324 | 3' | -57 | NC_001798.1 | + | 8394 | 0.66 | 0.863621 |
|
Target: 5'- aGGGGGGgGGGGGGAGagggaaAGCAa-CGg -3' miRNA: 3'- gCCCCUCaUCCCCCUCga----UUGUgaGC- -5' |
|||||||
| 5324 | 3' | -57 | NC_001798.1 | + | 127463 | 0.66 | 0.891807 |
|
Target: 5'- gCGGGGGGgAGGGGcuGCcgcgaGCUCGg -3' miRNA: 3'- -GCCCCUCaUCCCCcuCGauug-UGAGC- -5' |
|||||||
<< Previous Page | Next Page >>
Note:
When operating RNAhybrid, the pipeline first calculates the perfect minimum free energy (Perfect mfe *) of a putative miRNA when the entire putative miRNA binds to a perfectly complementary target site, then it calculates the minimum free energy of RNA duplex (mfe of the miRNA/mRNA duplex), abbreviated as Rd_mfe. An alignment for which the Rd_mfe to its correspondent Perfect mfe ratio (R_P_ratio #) is more than 66% is regarded as a positive alignment as described by Krek et al. (21). The P_value is calculated by RNAhybrid.
Back To miRNA display CGI home