Results 41 - 60 of 319 are showing below:
Show page:
<< Previous Page | Next Page >>
ID | Location | Perfect MFE.* | RefSeq Acc. | strand | Start Position |
R_P_ratio![]() |
P value |
Predicted miRNA align pattern | |||||||
5395 | 5' | -62.9 | NC_001798.1 | + | 111266 | 0.66 | 0.693246 |
Target: 5'- aUCGGCCa--ACGUCGGUucgucGGGCGCGg -3' miRNA: 3'- gGGCCGGgccUGCAGCCG-----CCUGUGCg -5' |
|||||||
5395 | 5' | -62.9 | NC_001798.1 | + | 112765 | 0.66 | 0.693246 |
Target: 5'- aUCaGCCCGcGGgGagGGCGGACGCa- -3' miRNA: 3'- gGGcCGGGC-CUgCagCCGCCUGUGcg -5' |
|||||||
5395 | 5' | -62.9 | NC_001798.1 | + | 130187 | 0.66 | 0.693246 |
Target: 5'- aCCGGUcgaucUCGG-CGU-GGUGGgACACGCu -3' miRNA: 3'- gGGCCG-----GGCCuGCAgCCGCC-UGUGCG- -5' |
|||||||
5395 | 5' | -62.9 | NC_001798.1 | + | 132696 | 0.66 | 0.693246 |
Target: 5'- aCgCGGCgCaGGCG-CGGgGGuCGCGCa -3' miRNA: 3'- -GgGCCGgGcCUGCaGCCgCCuGUGCG- -5' |
|||||||
5395 | 5' | -62.9 | NC_001798.1 | + | 140505 | 0.66 | 0.693246 |
Target: 5'- aCCCGGCCaaccuucCGg-GGUGGACGCGg -3' miRNA: 3'- -GGGCCGGgccu---GCagCCGCCUGUGCg -5' |
|||||||
5395 | 5' | -62.9 | NC_001798.1 | + | 139936 | 0.66 | 0.693246 |
Target: 5'- gCgGGCCCuGGCGgcgcacgggGGCGaaGACGCGCg -3' miRNA: 3'- gGgCCGGGcCUGCag-------CCGC--CUGUGCG- -5' |
|||||||
5395 | 5' | -62.9 | NC_001798.1 | + | 150367 | 0.66 | 0.683834 |
Target: 5'- aCCGGCacggCGGGCGgcgCGGgccCGGcCGCGUc -3' miRNA: 3'- gGGCCGg---GCCUGCa--GCC---GCCuGUGCG- -5' |
|||||||
5395 | 5' | -62.9 | NC_001798.1 | + | 148905 | 0.66 | 0.674387 |
Target: 5'- cCCCGGCCCcccuGCG-CGGgGGAgcUGCa -3' miRNA: 3'- -GGGCCGGGcc--UGCaGCCgCCUguGCG- -5' |
|||||||
5395 | 5' | -62.9 | NC_001798.1 | + | 102381 | 0.66 | 0.67817 |
Target: 5'- aCCC-GCCUGG-CgGUCGGCGGcgauggcccccaccaGCGCGg -3' miRNA: 3'- -GGGcCGGGCCuG-CAGCCGCC---------------UGUGCg -5' |
|||||||
5395 | 5' | -62.9 | NC_001798.1 | + | 102507 | 0.66 | 0.67817 |
Target: 5'- gCCGGCgCCGGGguguccguaggccacCGUCcccGCGGccggcaggccGCACGCg -3' miRNA: 3'- gGGCCG-GGCCU---------------GCAGc--CGCC----------UGUGCG- -5' |
|||||||
5395 | 5' | -62.9 | NC_001798.1 | + | 101741 | 0.66 | 0.683834 |
Target: 5'- -gCGGCCCGGGCcguGUCcacguucacGUGGGcCGCGCu -3' miRNA: 3'- ggGCCGGGCCUG---CAGc--------CGCCU-GUGCG- -5' |
|||||||
5395 | 5' | -62.9 | NC_001798.1 | + | 69161 | 0.66 | 0.683834 |
Target: 5'- gCCGG-CCGGGCGgagcccgaUGGCGGGcCAgGUg -3' miRNA: 3'- gGGCCgGGCCUGCa-------GCCGCCU-GUgCG- -5' |
|||||||
5395 | 5' | -62.9 | NC_001798.1 | + | 77260 | 0.66 | 0.683834 |
Target: 5'- gUCGGCCCuGGGCG-CGGCcGcC-CGCg -3' miRNA: 3'- gGGCCGGG-CCUGCaGCCGcCuGuGCG- -5' |
|||||||
5395 | 5' | -62.9 | NC_001798.1 | + | 83660 | 0.66 | 0.683834 |
Target: 5'- -gCGGCUcgCGGGCGUCugggaugcacuGGCGGGCGgGa -3' miRNA: 3'- ggGCCGG--GCCUGCAG-----------CCGCCUGUgCg -5' |
|||||||
5395 | 5' | -62.9 | NC_001798.1 | + | 86408 | 0.66 | 0.683834 |
Target: 5'- gCCGGUCgUGGACcagcucgaGGCGGACcccgagGCGCa -3' miRNA: 3'- gGGCCGG-GCCUGcag-----CCGCCUG------UGCG- -5' |
|||||||
5395 | 5' | -62.9 | NC_001798.1 | + | 128946 | 0.66 | 0.683834 |
Target: 5'- uUCGcGCCCGGGCGcguuccgggccCGGaGGAgGCGCu -3' miRNA: 3'- gGGC-CGGGCCUGCa----------GCCgCCUgUGCG- -5' |
|||||||
5395 | 5' | -62.9 | NC_001798.1 | + | 134153 | 0.66 | 0.683834 |
Target: 5'- uCUCGGCCCccgGGGcCGUCG-CGGccgccCGCGCc -3' miRNA: 3'- -GGGCCGGG---CCU-GCAGCcGCCu----GUGCG- -5' |
|||||||
5395 | 5' | -62.9 | NC_001798.1 | + | 16668 | 0.66 | 0.683834 |
Target: 5'- aCCCaagGGCCCGGGauCGUCcaaccGgGGAUAgGCa -3' miRNA: 3'- -GGG---CCGGGCCU--GCAGc----CgCCUGUgCG- -5' |
|||||||
5395 | 5' | -62.9 | NC_001798.1 | + | 68089 | 0.66 | 0.683834 |
Target: 5'- aCCUGGCUuuauugagaCGGACGcaCGG-GGcCGCGCa -3' miRNA: 3'- -GGGCCGG---------GCCUGCa-GCCgCCuGUGCG- -5' |
|||||||
5395 | 5' | -62.9 | NC_001798.1 | + | 99309 | 0.66 | 0.683834 |
Target: 5'- -aCGGCacgaCGGucaacugcauCGUCgaggaGGUGGACGCGCg -3' miRNA: 3'- ggGCCGg---GCCu---------GCAG-----CCGCCUGUGCG- -5' |
<< Previous Page | Next Page >>
Note:
When operating RNAhybrid, the pipeline first calculates the perfect minimum free energy (Perfect mfe *) of a putative miRNA when the entire putative miRNA binds to a perfectly complementary target site, then it calculates the minimum free energy of RNA duplex (mfe of the miRNA/mRNA duplex), abbreviated as Rd_mfe. An alignment for which the Rd_mfe to its correspondent Perfect mfe ratio (R_P_ratio #) is more than 66% is regarded as a positive alignment as described by Krek et al. (21). The P_value is calculated by RNAhybrid.
Back To miRNA display CGI home