Results 81 - 90 of 90 are showing below:
Show page:
<< Previous Page | Next Page >>
ID | Location | Perfect MFE.* | RefSeq Acc. | strand | Start Position | R_P_ratio# | P value |
Predicted miRNA align pattern | |||||||
5501 | 5' | -48.7 | NC_001798.1 | + | 147133 | 0.66 | 0.998849 |
Target: 5'- cGGAGGcuuuuuuCGAuucccggCCGGgGGUCCCg -3' miRNA: 3'- -CUUCCu------GCUuuauua-GGCCgCUAGGG- -5' |
|||||||
5501 | 5' | -48.7 | NC_001798.1 | + | 153968 | 0.67 | 0.998656 |
Target: 5'- cGAGGACGcgg----CCGGCGcgCUCu -3' miRNA: 3'- cUUCCUGCuuuauuaGGCCGCuaGGG- -5' |
|||||||
5501 | 5' | -48.7 | NC_001798.1 | + | 131377 | 0.67 | 0.998656 |
Target: 5'- cGggGGAuccccUGggGgc--CCGGCG-UCCCa -3' miRNA: 3'- -CuuCCU-----GCuuUauuaGGCCGCuAGGG- -5' |
|||||||
5501 | 5' | -48.7 | NC_001798.1 | + | 105743 | 0.67 | 0.998656 |
Target: 5'- -cGGGugGGugucg-CCGGCGAcaaaugagUCCCc -3' miRNA: 3'- cuUCCugCUuuauuaGGCCGCU--------AGGG- -5' |
|||||||
5501 | 5' | -48.7 | NC_001798.1 | + | 59860 | 0.67 | 0.998656 |
Target: 5'- cGGAGGAgGAGuccuggcuGUGGUCgGGCcggCCCg -3' miRNA: 3'- -CUUCCUgCUU--------UAUUAGgCCGcuaGGG- -5' |
|||||||
5501 | 5' | -48.7 | NC_001798.1 | + | 2575 | 0.67 | 0.998656 |
Target: 5'- -cGGGGCGggGggcGUCCGcGCGG-CUCu -3' miRNA: 3'- cuUCCUGCuuUau-UAGGC-CGCUaGGG- -5' |
|||||||
5501 | 5' | -48.7 | NC_001798.1 | + | 22776 | 0.67 | 0.998493 |
Target: 5'- cGggGGACGucuccgggccgcggcGGAgacgaCCGGCGGcCCCg -3' miRNA: 3'- -CuuCCUGC---------------UUUauua-GGCCGCUaGGG- -5' |
|||||||
5501 | 5' | -48.7 | NC_001798.1 | + | 85827 | 0.67 | 0.998049 |
Target: 5'- gGggGGGCGggGg---CgGGCGGgggCUCg -3' miRNA: 3'- -CuuCCUGCuuUauuaGgCCGCUa--GGG- -5' |
|||||||
5501 | 5' | -48.7 | NC_001798.1 | + | 61173 | 0.67 | 0.998049 |
Target: 5'- gGggGGAagagaGAGAUGGUcggccugcaCCGGCGcgCgCCg -3' miRNA: 3'- -CuuCCUg----CUUUAUUA---------GGCCGCuaG-GG- -5' |
|||||||
5501 | 5' | -48.7 | NC_001798.1 | + | 14995 | 0.68 | 0.99672 |
Target: 5'- gGggGGGCGAGGcguGUUgggGGCGAgcggCCCa -3' miRNA: 3'- -CuuCCUGCUUUau-UAGg--CCGCUa---GGG- -5' |
<< Previous Page | Next Page >>
Note:
When operating RNAhybrid, the pipeline first calculates the perfect minimum free energy (Perfect mfe *) of a putative miRNA when the entire putative miRNA binds to a perfectly complementary target site, then it calculates the minimum free energy of RNA duplex (mfe of the miRNA/mRNA duplex), abbreviated as Rd_mfe. An alignment for which the Rd_mfe to its correspondent Perfect mfe ratio (R_P_ratio #) is more than 66% is regarded as a positive alignment as described by Krek et al. (21). The P_value is calculated by RNAhybrid.
Back To miRNA display CGI home