Results 21 - 24 of 24 are showing below:
Show page:
<< Previous Page | Next Page >>
ID | Location | Perfect MFE.* | RefSeq Acc. | strand | Start Position |
R_P_ratio![]() |
P value |
Predicted miRNA align pattern | |||||||
5587 | 3' | -57.7 | NC_001806.1 | + | 54972 | 0.66 | 0.834791 |
Target: 5'- --aCAccUGGuGGUCGUCCUcgaaccagacaaaCUCCACGGg -3' miRNA: 3'- gaaGU--ACCuCCGGCAGGG-------------GAGGUGUC- -5' |
|||||||
5587 | 3' | -57.7 | NC_001806.1 | + | 75728 | 0.66 | 0.827348 |
Target: 5'- --aCGUGGAGGCCGUgCUggaCCGCGu -3' miRNA: 3'- gaaGUACCUCCGGCAgGGga-GGUGUc -5' |
|||||||
5587 | 3' | -57.7 | NC_001806.1 | + | 3521 | 0.66 | 0.818913 |
Target: 5'- --gCGUcGGGGUCGUCgCCCcCCGCGGg -3' miRNA: 3'- gaaGUAcCUCCGGCAG-GGGaGGUGUC- -5' |
|||||||
5587 | 3' | -57.7 | NC_001806.1 | + | 66830 | 0.66 | 0.851581 |
Target: 5'- --cCcgGGuGGCCGgugugcgCCgCCUCCugGGg -3' miRNA: 3'- gaaGuaCCuCCGGCa------GG-GGAGGugUC- -5' |
<< Previous Page | Next Page >>
Note:
When operating RNAhybrid, the pipeline first calculates the perfect minimum free energy (Perfect mfe *) of a putative miRNA when the entire putative miRNA binds to a perfectly complementary target site, then it calculates the minimum free energy of RNA duplex (mfe of the miRNA/mRNA duplex), abbreviated as Rd_mfe. An alignment for which the Rd_mfe to its correspondent Perfect mfe ratio (R_P_ratio #) is more than 66% is regarded as a positive alignment as described by Krek et al. (21). The P_value is calculated by RNAhybrid.
Back To miRNA display CGI home