Results 61 - 72 of 72 are showing below:
Show page:
<< Previous Page | Next Page >>
ID | Location | Perfect MFE.* | RefSeq Acc. | strand | Start Position |
R_P_ratio![]() |
P value |
Predicted miRNA align pattern | |||||||
5945 | 5' | -57.2 | NC_001806.1 | + | 151176 | 0.66 | 0.860392 |
Target: 5'- cUCCGCggugaCGCgcAGGCGGaGGGCGAGGc -3' miRNA: 3'- aGGGCG-----GCGauUCCGCUgCUCGUUCU- -5' |
|||||||
5945 | 5' | -57.2 | NC_001806.1 | + | 77495 | 0.66 | 0.860392 |
Target: 5'- cUgCGCCGCcGGGGCGaggcguaccuGCGAGUGAGc -3' miRNA: 3'- aGgGCGGCGaUUCCGC----------UGCUCGUUCu -5' |
|||||||
5945 | 5' | -57.2 | NC_001806.1 | + | 49156 | 0.66 | 0.841593 |
Target: 5'- gCCCGUgGCggacgagccagcGGGCGAUGGGguGGGg -3' miRNA: 3'- aGGGCGgCGau----------UCCGCUGCUCguUCU- -5' |
|||||||
5945 | 5' | -57.2 | NC_001806.1 | + | 41450 | 0.66 | 0.844004 |
Target: 5'- -gCCGCCGCUucGGCGgacACGAccgcuucggccagGCGAGc -3' miRNA: 3'- agGGCGGCGAuuCCGC---UGCU-------------CGUUCu -5' |
|||||||
5945 | 5' | -57.2 | NC_001806.1 | + | 22716 | 0.66 | 0.844804 |
Target: 5'- cUCCC-CCGCggGGGGCGACGAc----- -3' miRNA: 3'- -AGGGcGGCGa-UUCCGCUGCUcguucu -5' |
|||||||
5945 | 5' | -57.2 | NC_001806.1 | + | 4654 | 0.66 | 0.844804 |
Target: 5'- cUCCGCgGCggcuGGGcCGGCGGGCGcGGc -3' miRNA: 3'- aGGGCGgCGau--UCC-GCUGCUCGUuCU- -5' |
|||||||
5945 | 5' | -57.2 | NC_001806.1 | + | 103197 | 0.66 | 0.851133 |
Target: 5'- cUCCGCCGCcgucucccggggGAGGUuaaaGACGGGCGAc- -3' miRNA: 3'- aGGGCGGCGa-----------UUCCG----CUGCUCGUUcu -5' |
|||||||
5945 | 5' | -57.2 | NC_001806.1 | + | 5745 | 0.66 | 0.852696 |
Target: 5'- gUUCCGCaUGCUaacGAGGa-ACGGGCAGGGg -3' miRNA: 3'- -AGGGCG-GCGA---UUCCgcUGCUCGUUCU- -5' |
|||||||
5945 | 5' | -57.2 | NC_001806.1 | + | 147174 | 0.66 | 0.852696 |
Target: 5'- cCCCGCC-CgagGAGGCGGaagcgGAGgAGGAc -3' miRNA: 3'- aGGGCGGcGa--UUCCGCUg----CUCgUUCU- -5' |
|||||||
5945 | 5' | -57.2 | NC_001806.1 | + | 122873 | 0.66 | 0.858869 |
Target: 5'- -gCCGCCGCgccacggccgagAAGaGCGGCGAGUg--- -3' miRNA: 3'- agGGCGGCGa-----------UUC-CGCUGCUCGuucu -5' |
|||||||
5945 | 5' | -57.2 | NC_001806.1 | + | 63633 | 0.66 | 0.860392 |
Target: 5'- uUCUCGCCGUccAGGUGGCGAauCAGGc -3' miRNA: 3'- -AGGGCGGCGauUCCGCUGCUc-GUUCu -5' |
|||||||
5945 | 5' | -57.2 | NC_001806.1 | + | 150674 | 0.66 | 0.875167 |
Target: 5'- cCCCGCCGCgcuGGCGGCc-GCc--- -3' miRNA: 3'- aGGGCGGCGauuCCGCUGcuCGuucu -5' |
<< Previous Page | Next Page >>
Note:
When operating RNAhybrid, the pipeline first calculates the perfect minimum free energy (Perfect mfe *) of a putative miRNA when the entire putative miRNA binds to a perfectly complementary target site, then it calculates the minimum free energy of RNA duplex (mfe of the miRNA/mRNA duplex), abbreviated as Rd_mfe. An alignment for which the Rd_mfe to its correspondent Perfect mfe ratio (R_P_ratio #) is more than 66% is regarded as a positive alignment as described by Krek et al. (21). The P_value is calculated by RNAhybrid.
Back To miRNA display CGI home