Results 61 - 65 of 65 are showing below:
Show page:
<< Previous Page | Next Page >>
| ID | Location | Perfect MFE.* | RefSeq Acc. | strand | Start Position |
R_P_ratio #
|
P value |
| Predicted miRNA align pattern | |||||||
| 5949 | 5' | -63.1 | NC_001806.1 | + | 146761 | 0.66 | 0.590746 |
|
Target: 5'- gAGGCUGUuccacUCCGaCgCGG-GGGCCGUc -3' miRNA: 3'- gUCCGGCAu----AGGCaG-GCCgCCCGGCA- -5' |
|||||||
| 5949 | 5' | -63.1 | NC_001806.1 | + | 17459 | 0.66 | 0.582064 |
|
Target: 5'- -cGGUCGUcGUUCGUCCGGCcaaccuucgacgguuGGCCGa -3' miRNA: 3'- guCCGGCA-UAGGCAGGCCGc--------------CCGGCa -5' |
|||||||
| 5949 | 5' | -63.1 | NC_001806.1 | + | 94388 | 0.66 | 0.581101 |
|
Target: 5'- uCAGGCUGgauaCGUauGGCGGGaCCGUc -3' miRNA: 3'- -GUCCGGCauagGCAggCCGCCC-GGCA- -5' |
|||||||
| 5949 | 5' | -63.1 | NC_001806.1 | + | 56710 | 0.66 | 0.629538 |
|
Target: 5'- cCGGGUCGcucuggGUCC-UCCGGgGGGCgGc -3' miRNA: 3'- -GUCCGGCa-----UAGGcAGGCCgCCCGgCa -5' |
|||||||
| 5949 | 5' | -63.1 | NC_001806.1 | + | 95050 | 0.66 | 0.590746 |
|
Target: 5'- -uGGCCGUggaacuggcgcuGUUCGggCGGCGGGCgGa -3' miRNA: 3'- guCCGGCA------------UAGGCagGCCGCCCGgCa -5' |
|||||||
<< Previous Page | Next Page >>
Note:
When operating RNAhybrid, the pipeline first calculates the perfect minimum free energy (Perfect mfe *) of a putative miRNA when the entire putative miRNA binds to a perfectly complementary target site, then it calculates the minimum free energy of RNA duplex (mfe of the miRNA/mRNA duplex), abbreviated as Rd_mfe. An alignment for which the Rd_mfe to its correspondent Perfect mfe ratio (R_P_ratio #) is more than 66% is regarded as a positive alignment as described by Krek et al. (21). The P_value is calculated by RNAhybrid.
Back To miRNA display CGI home