Results 81 - 85 of 85 are showing below:
Show page:
<< Previous Page | Next Page >>
ID | Location | Perfect MFE.* | RefSeq Acc. | strand | Start Position |
R_P_ratio![]() |
P value |
Predicted miRNA align pattern | |||||||
5989 | 5' | -51 | NC_001806.1 | + | 73459 | 0.66 | 0.992928 |
Target: 5'- -cCGGGguGG-CcGGCCCGGCCG-CCg -3' miRNA: 3'- caGCUCuuCCuGuUUGGGUUGGCaGG- -5' |
|||||||
5989 | 5' | -51 | NC_001806.1 | + | 94063 | 0.66 | 0.991871 |
Target: 5'- cUCGGGcAGGuGCAGACCUAugUGUUUc -3' miRNA: 3'- cAGCUCuUCC-UGUUUGGGUugGCAGG- -5' |
|||||||
5989 | 5' | -51 | NC_001806.1 | + | 15019 | 0.66 | 0.991871 |
Target: 5'- aGUCGGGucguGGGGCGAGuugCCAGCgGcCCg -3' miRNA: 3'- -CAGCUCu---UCCUGUUUg--GGUUGgCaGG- -5' |
|||||||
5989 | 5' | -51 | NC_001806.1 | + | 82422 | 0.66 | 0.995457 |
Target: 5'- --aGAGuAGGGGCccGCCUccCCGUCCc -3' miRNA: 3'- cagCUC-UUCCUGuuUGGGuuGGCAGG- -5' |
|||||||
5989 | 5' | -51 | NC_001806.1 | + | 30501 | 0.66 | 0.992928 |
Target: 5'- uGUCGAGcAGGAgGcGgCgGugCGUCCg -3' miRNA: 3'- -CAGCUCuUCCUgUuUgGgUugGCAGG- -5' |
<< Previous Page | Next Page >>
Note:
When operating RNAhybrid, the pipeline first calculates the perfect minimum free energy (Perfect mfe *) of a putative miRNA when the entire putative miRNA binds to a perfectly complementary target site, then it calculates the minimum free energy of RNA duplex (mfe of the miRNA/mRNA duplex), abbreviated as Rd_mfe. An alignment for which the Rd_mfe to its correspondent Perfect mfe ratio (R_P_ratio #) is more than 66% is regarded as a positive alignment as described by Krek et al. (21). The P_value is calculated by RNAhybrid.
Back To miRNA display CGI home