miRNA display CGI

Results 21 - 30 of 30 are showing below:
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ID	Location	Perfect MFE.*	RefSeq Acc.	strand	Start Position	R_P_ratio#	P value
	Predicted miRNA align pattern
6001	3'	-58.7	NC_001806.1	+	89237	0.68	0.670219
	Target:  5'- aGUUUUGCCucaaacaagGCGGgggucccCGGCUGGCUCcGCg -3' miRNA:   3'- gCAGAGCGG---------CGCU-------GUCGACCGAGaCG- -5'
6001	3'	-58.7	NC_001806.1	+	95631	0.68	0.710796
	Target:  5'- aCG-UUCGCCGCGGucGCcaacGGCUUUGCg -3' miRNA:   3'- -GCaGAGCGGCGCUguCGa---CCGAGACG- -5'
6001	3'	-58.7	NC_001806.1	+	96225	0.66	0.804029
	Target:  5'- uCGUCgagagCGCCccCGACGGCUGuaUCgGCc -3' miRNA:   3'- -GCAGa----GCGGc-GCUGUCGACcgAGaCG- -5'
6001	3'	-58.7	NC_001806.1	+	103805	0.75	0.333256
	Target:  5'- gCGgcgC-CGCCGCGGCGGCgacgGGCUC-GCu -3' miRNA:   3'- -GCa--GaGCGGCGCUGUCGa---CCGAGaCG- -5'
6001	3'	-58.7	NC_001806.1	+	106783	0.66	0.821147
	Target:  5'- aCGcCUcCGCCGCGugGGC-GGCUa--- -3' miRNA:   3'- -GCaGA-GCGGCGCugUCGaCCGAgacg -5'
6001	3'	-58.7	NC_001806.1	+	119010	0.67	0.749346
	Target:  5'- gCGUCUaugacccguaCGCCGUGGCGGCgcUGcGCcUUGCg -3' miRNA:   3'- -GCAGA----------GCGGCGCUGUCG--AC-CGaGACG- -5'
6001	3'	-58.7	NC_001806.1	+	131809	0.66	0.776336
	Target:  5'- gGUCUCcgucaCCGCGACggAGCUgcgggauuucuacGGCUCcGCg -3' miRNA:   3'- gCAGAGc----GGCGCUG--UCGA-------------CCGAGaCG- -5'
6001	3'	-58.7	NC_001806.1	+	133060	0.66	0.798773
	Target:  5'- --cCUgCGCUGCGGCAGCuccugggugggguaaUGGCcgccgUCUGCc -3' miRNA:   3'- gcaGA-GCGGCGCUGUCG---------------ACCG-----AGACG- -5'
6001	3'	-58.7	NC_001806.1	+	139117	0.69	0.61008
	Target:  5'- cCGgCUCGCCGCG-CGGggGGCUgauguccgucgccCUGCa -3' miRNA:   3'- -GCaGAGCGGCGCuGUCgaCCGA-------------GACG- -5'
6001	3'	-58.7	NC_001806.1	+	148107	0.72	0.456829
	Target:  5'- uGUCcgaGCCGCGGcCGGCUGGggggCUGCg -3' miRNA:   3'- gCAGag-CGGCGCU-GUCGACCga--GACG- -5'

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Note:
      When operating RNAhybrid, the pipeline first calculates the perfect minimum free energy (Perfect mfe *) of a putative miRNA when the entire putative miRNA binds to a perfectly complementary target site, then it calculates the minimum free energy of RNA duplex (mfe of the miRNA/mRNA duplex), abbreviated as Rd_mfe. An alignment for which the Rd_mfe to its correspondent Perfect mfe ratio (R_P_ratio #) is more than 66% is regarded as a positive alignment as described by Krek et al. (21). The P_value is calculated by RNAhybrid.

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