Results 101 - 120 of 391 are showing below:
Show page:
<< Previous Page | Next Page >>
ID | Location | Perfect MFE.* | RefSeq Acc. | strand | Start Position | R_P_ratio# | P value |
Predicted miRNA align pattern | |||||||
6365 | 5' | -58.6 | NC_001847.1 | + | 14157 | 0.68 | 0.668991 |
Target: 5'- gGCGGCCG-CUaGGGcgaCGgCCGCGCu -3' miRNA: 3'- gCGCCGGUaGAaCCUag-GUgGGCGCG- -5' |
|||||||
6365 | 5' | -58.6 | NC_001847.1 | + | 81827 | 0.68 | 0.679003 |
Target: 5'- gGCGcGCCGUCUg----UCGCCCGcCGCa -3' miRNA: 3'- gCGC-CGGUAGAaccuaGGUGGGC-GCG- -5' |
|||||||
6365 | 5' | -58.6 | NC_001847.1 | + | 50513 | 0.68 | 0.688978 |
Target: 5'- gCGCgGGCCAggaguUCgcgcUGGA-CCACCUgGCGCu -3' miRNA: 3'- -GCG-CCGGU-----AGa---ACCUaGGUGGG-CGCG- -5' |
|||||||
6365 | 5' | -58.6 | NC_001847.1 | + | 42813 | 0.68 | 0.688978 |
Target: 5'- cCGUGGCCAUCgUGGuugCCGCCUuuGa -3' miRNA: 3'- -GCGCCGGUAGaACCua-GGUGGGcgCg -5' |
|||||||
6365 | 5' | -58.6 | NC_001847.1 | + | 43541 | 0.68 | 0.698907 |
Target: 5'- uCGCGGCCAaCacGGcgCCGCgguUUGCGCg -3' miRNA: 3'- -GCGCCGGUaGaaCCuaGGUG---GGCGCG- -5' |
|||||||
6365 | 5' | -58.6 | NC_001847.1 | + | 69369 | 0.69 | 0.608587 |
Target: 5'- gCGCGGCgGUCUuugcggcggUGGcgCUGCCgGCGg -3' miRNA: 3'- -GCGCCGgUAGA---------ACCuaGGUGGgCGCg -5' |
|||||||
6365 | 5' | -58.6 | NC_001847.1 | + | 27933 | 0.69 | 0.588509 |
Target: 5'- gGCGGCCGUCUcGaGuUCCuCCuCGCGUc -3' miRNA: 3'- gCGCCGGUAGAaC-CuAGGuGG-GCGCG- -5' |
|||||||
6365 | 5' | -58.6 | NC_001847.1 | + | 83296 | 0.76 | 0.250778 |
Target: 5'- uGCGGCC-UCcu-GAUCgACCCGCGCa -3' miRNA: 3'- gCGCCGGuAGaacCUAGgUGGGCGCG- -5' |
|||||||
6365 | 5' | -58.6 | NC_001847.1 | + | 121884 | 0.75 | 0.288454 |
Target: 5'- aCGCGGCCugccUGcGAaCCGCCCGCGUg -3' miRNA: 3'- -GCGCCGGuagaAC-CUaGGUGGGCGCG- -5' |
|||||||
6365 | 5' | -58.6 | NC_001847.1 | + | 144 | 0.74 | 0.348446 |
Target: 5'- gCGCGGCCAUCUUGcuUCCAaacucauuagcauacCCCGCcCa -3' miRNA: 3'- -GCGCCGGUAGAACcuAGGU---------------GGGCGcG- -5' |
|||||||
6365 | 5' | -58.6 | NC_001847.1 | + | 104496 | 0.73 | 0.376751 |
Target: 5'- gCGCGGCCAguUCUcgGGGUCCA-CgGCGUc -3' miRNA: 3'- -GCGCCGGU--AGAa-CCUAGGUgGgCGCG- -5' |
|||||||
6365 | 5' | -58.6 | NC_001847.1 | + | 50056 | 0.72 | 0.453952 |
Target: 5'- gGCGGCCGc---GGGUCCGCgCGCGg -3' miRNA: 3'- gCGCCGGUagaaCCUAGGUGgGCGCg -5' |
|||||||
6365 | 5' | -58.6 | NC_001847.1 | + | 10794 | 0.71 | 0.481539 |
Target: 5'- aCGCgGGCCuguUUUUGGGcuaCugCCGCGCg -3' miRNA: 3'- -GCG-CCGGu--AGAACCUag-GugGGCGCG- -5' |
|||||||
6365 | 5' | -58.6 | NC_001847.1 | + | 47708 | 0.71 | 0.500373 |
Target: 5'- gGCGGCCG-CcgGGAacgccagcccgUCGCCCGCGCa -3' miRNA: 3'- gCGCCGGUaGaaCCUa----------GGUGGGCGCG- -5' |
|||||||
6365 | 5' | -58.6 | NC_001847.1 | + | 11688 | 0.71 | 0.509912 |
Target: 5'- gGCGGCCGUCgccGGG-CCaaGCCCG-GCa -3' miRNA: 3'- gCGCCGGUAGaa-CCUaGG--UGGGCgCG- -5' |
|||||||
6365 | 5' | -58.6 | NC_001847.1 | + | 477 | 0.7 | 0.538962 |
Target: 5'- gGC-GCCGUCaUGGGU--GCCCGCGCc -3' miRNA: 3'- gCGcCGGUAGaACCUAggUGGGCGCG- -5' |
|||||||
6365 | 5' | -58.6 | NC_001847.1 | + | 94163 | 0.7 | 0.548773 |
Target: 5'- uCGCGGCgG-CUgcUGGGcgcggCCGCCuCGCGCg -3' miRNA: 3'- -GCGCCGgUaGA--ACCUa----GGUGG-GCGCG- -5' |
|||||||
6365 | 5' | -58.6 | NC_001847.1 | + | 49248 | 0.7 | 0.55765 |
Target: 5'- aCGCGGCUcgCcUGGA-CCucgacaaGCUCGCGCu -3' miRNA: 3'- -GCGCCGGuaGaACCUaGG-------UGGGCGCG- -5' |
|||||||
6365 | 5' | -58.6 | NC_001847.1 | + | 57935 | 0.7 | 0.578513 |
Target: 5'- aCGCGGCCAaacUGGAgCagGCCCGCGa -3' miRNA: 3'- -GCGCCGGUagaACCUaGg-UGGGCGCg -5' |
|||||||
6365 | 5' | -58.6 | NC_001847.1 | + | 106810 | 0.69 | 0.588509 |
Target: 5'- gCGCGGCCccgCggGGcgCCggGCCCgGCGCc -3' miRNA: 3'- -GCGCCGGua-GaaCCuaGG--UGGG-CGCG- -5' |
<< Previous Page | Next Page >>
Note:
When operating RNAhybrid, the pipeline first calculates the perfect minimum free energy (Perfect mfe *) of a putative miRNA when the entire putative miRNA binds to a perfectly complementary target site, then it calculates the minimum free energy of RNA duplex (mfe of the miRNA/mRNA duplex), abbreviated as Rd_mfe. An alignment for which the Rd_mfe to its correspondent Perfect mfe ratio (R_P_ratio #) is more than 66% is regarded as a positive alignment as described by Krek et al. (21). The P_value is calculated by RNAhybrid.
Back To miRNA display CGI home