Results 61 - 80 of 134 are showing below:
Show page:
<< Previous Page | Next Page >>
ID | Location | Perfect MFE.* | RefSeq Acc. | strand | Start Position | R_P_ratio# |
P value![]() |
Predicted miRNA align pattern | |||||||
6373 | 3' | -55.9 | NC_001847.1 | + | 5062 | 0.67 | 0.8149 |
Target: 5'- -cGgGACGgacgGCGGGCCGggaGCgggcGGCAg -3' miRNA: 3'- gaCgCUGCa---CGCCCGGCa--CGau--UUGU- -5' |
|||||||
6373 | 3' | -55.9 | NC_001847.1 | + | 114050 | 0.67 | 0.8149 |
Target: 5'- -gGCGugGUGaUGGcGUCGUGCUuuACc -3' miRNA: 3'- gaCGCugCAC-GCC-CGGCACGAuuUGu -5' |
|||||||
6373 | 3' | -55.9 | NC_001847.1 | + | 9742 | 0.67 | 0.8149 |
Target: 5'- -cGCGACcggGCGGGCCcUGCcccgGGGCGc -3' miRNA: 3'- gaCGCUGca-CGCCCGGcACGa---UUUGU- -5' |
|||||||
6373 | 3' | -55.9 | NC_001847.1 | + | 125797 | 0.67 | 0.8149 |
Target: 5'- -aGCGAguCG-GCGGGCCGgcggGCgu-GCAg -3' miRNA: 3'- gaCGCU--GCaCGCCCGGCa---CGauuUGU- -5' |
|||||||
6373 | 3' | -55.9 | NC_001847.1 | + | 112555 | 0.67 | 0.8149 |
Target: 5'- -cGCGACcggGCGGGCCcUGCcccgGGGCGc -3' miRNA: 3'- gaCGCUGca-CGCCCGGcACGa---UUUGU- -5' |
|||||||
6373 | 3' | -55.9 | NC_001847.1 | + | 37594 | 0.68 | 0.809597 |
Target: 5'- gCUGCGGCGgccGgGGGCCGgcccgcGCUcuuuugcccgacgggGAGCAg -3' miRNA: 3'- -GACGCUGCa--CgCCCGGCa-----CGA---------------UUUGU- -5' |
|||||||
6373 | 3' | -55.9 | NC_001847.1 | + | 22951 | 0.68 | 0.806029 |
Target: 5'- gCUGgGugGgcugggGUGGGCUGgGCUGGGCu -3' miRNA: 3'- -GACgCugCa-----CGCCCGGCaCGAUUUGu -5' |
|||||||
6373 | 3' | -55.9 | NC_001847.1 | + | 71442 | 0.68 | 0.806029 |
Target: 5'- -cGCGACGgGCGcGGCUuugaGCUGAGCGu -3' miRNA: 3'- gaCGCUGCaCGC-CCGGca--CGAUUUGU- -5' |
|||||||
6373 | 3' | -55.9 | NC_001847.1 | + | 85793 | 0.68 | 0.806029 |
Target: 5'- gUGCGcgucgaGgGUGCGGGCgCGUGCagcGACGg -3' miRNA: 3'- gACGC------UgCACGCCCG-GCACGau-UUGU- -5' |
|||||||
6373 | 3' | -55.9 | NC_001847.1 | + | 73767 | 0.68 | 0.806029 |
Target: 5'- -gGCGGCGgcGCGGGCCGcuacgaGCgcgGGGCGc -3' miRNA: 3'- gaCGCUGCa-CGCCCGGCa-----CGa--UUUGU- -5' |
|||||||
6373 | 3' | -55.9 | NC_001847.1 | + | 72583 | 0.68 | 0.805133 |
Target: 5'- -cGCGAUGcGCGGGCUGggccaaaacgcgcUGCUGGccGCAc -3' miRNA: 3'- gaCGCUGCaCGCCCGGC-------------ACGAUU--UGU- -5' |
|||||||
6373 | 3' | -55.9 | NC_001847.1 | + | 68793 | 0.68 | 0.796997 |
Target: 5'- -cGCGGCGgccgcgcgaGCGGGCCGacggGggGAACAa -3' miRNA: 3'- gaCGCUGCa--------CGCCCGGCa---CgaUUUGU- -5' |
|||||||
6373 | 3' | -55.9 | NC_001847.1 | + | 8125 | 0.68 | 0.796997 |
Target: 5'- -cGCGGgGccccagggGCGGGCgGUGCUGcGCGa -3' miRNA: 3'- gaCGCUgCa-------CGCCCGgCACGAUuUGU- -5' |
|||||||
6373 | 3' | -55.9 | NC_001847.1 | + | 33708 | 0.68 | 0.796997 |
Target: 5'- -cGCGGCGgcGCGuGGCCGaGCUGGGgGa -3' miRNA: 3'- gaCGCUGCa-CGC-CCGGCaCGAUUUgU- -5' |
|||||||
6373 | 3' | -55.9 | NC_001847.1 | + | 45527 | 0.68 | 0.796997 |
Target: 5'- -gGCGGCGcgGacgGGGCCGUGCcgcGCAg -3' miRNA: 3'- gaCGCUGCa-Cg--CCCGGCACGauuUGU- -5' |
|||||||
6373 | 3' | -55.9 | NC_001847.1 | + | 44302 | 0.68 | 0.787813 |
Target: 5'- -cGCGGCGcgGCGGGCCa-GCgccaGAGCGg -3' miRNA: 3'- gaCGCUGCa-CGCCCGGcaCGa---UUUGU- -5' |
|||||||
6373 | 3' | -55.9 | NC_001847.1 | + | 134205 | 0.68 | 0.787813 |
Target: 5'- -aGCGGCGcgcGCGGGCCGaggGCg--GCGg -3' miRNA: 3'- gaCGCUGCa--CGCCCGGCa--CGauuUGU- -5' |
|||||||
6373 | 3' | -55.9 | NC_001847.1 | + | 57044 | 0.68 | 0.787813 |
Target: 5'- -cGCGcCcUGUGGGCCGaggcgGCUAAGCu -3' miRNA: 3'- gaCGCuGcACGCCCGGCa----CGAUUUGu -5' |
|||||||
6373 | 3' | -55.9 | NC_001847.1 | + | 28088 | 0.68 | 0.787813 |
Target: 5'- gCUGUGGCGccUGCccgGGGCCGcGCgcGACAc -3' miRNA: 3'- -GACGCUGC--ACG---CCCGGCaCGauUUGU- -5' |
|||||||
6373 | 3' | -55.9 | NC_001847.1 | + | 133567 | 0.68 | 0.787813 |
Target: 5'- -aGCGGCGcgcugGCGcGcGCCGUGCUGGccucGCGg -3' miRNA: 3'- gaCGCUGCa----CGC-C-CGGCACGAUU----UGU- -5' |
<< Previous Page | Next Page >>
Note:
When operating RNAhybrid, the pipeline first calculates the perfect minimum free energy (Perfect mfe *) of a putative miRNA when the entire putative miRNA binds to a perfectly complementary target site, then it calculates the minimum free energy of RNA duplex (mfe of the miRNA/mRNA duplex), abbreviated as Rd_mfe. An alignment for which the Rd_mfe to its correspondent Perfect mfe ratio (R_P_ratio #) is more than 66% is regarded as a positive alignment as described by Krek et al. (21). The P_value is calculated by RNAhybrid.
Back To miRNA display CGI home