Results 21 - 40 of 1224 are showing below:
Show page:
<< Previous Page | Next Page >>
ID | Location | Perfect MFE.* | RefSeq Acc. | strand | Start Position | R_P_ratio# | P value |
Predicted miRNA align pattern | |||||||
6473 | 5' | -62 | NC_001847.1 | + | 109834 | 0.66 | 0.651838 |
Target: 5'- -cCGCGCCCCuGUGGaCGaccACCGCAgCu -3' miRNA: 3'- gaGCGCGGGGcCGCUcGU---UGGCGUgG- -5' |
|||||||
6473 | 5' | -62 | NC_001847.1 | + | 121612 | 0.66 | 0.651838 |
Target: 5'- gUCGCGCugCCUaGCG-GCAGCCGC-UCg -3' miRNA: 3'- gAGCGCG--GGGcCGCuCGUUGGCGuGG- -5' |
|||||||
6473 | 5' | -62 | NC_001847.1 | + | 99603 | 0.66 | 0.651838 |
Target: 5'- -gCGcCGCCUCGGC-AGCcacGACCuCGCCg -3' miRNA: 3'- gaGC-GCGGGGCCGcUCG---UUGGcGUGG- -5' |
|||||||
6473 | 5' | -62 | NC_001847.1 | + | 7021 | 0.66 | 0.651838 |
Target: 5'- -cCGCGCCCCuGUGGaCGaccACCGCAgCu -3' miRNA: 3'- gaGCGCGGGGcCGCUcGU---UGGCGUgG- -5' |
|||||||
6473 | 5' | -62 | NC_001847.1 | + | 46081 | 0.66 | 0.651838 |
Target: 5'- --aGCGCCgccgaaacCCGGCGcGCcauGCCGuCGCCc -3' miRNA: 3'- gagCGCGG--------GGCCGCuCGu--UGGC-GUGG- -5' |
|||||||
6473 | 5' | -62 | NC_001847.1 | + | 92580 | 0.66 | 0.651838 |
Target: 5'- -cCGCGCCgCCgaGGagGAcGCGGCCGCGuCCu -3' miRNA: 3'- gaGCGCGG-GG--CCg-CU-CGUUGGCGU-GG- -5' |
|||||||
6473 | 5' | -62 | NC_001847.1 | + | 89042 | 0.66 | 0.651838 |
Target: 5'- -gUGCGCgCUgGGCGAcgGCAuggCGCGCCg -3' miRNA: 3'- gaGCGCG-GGgCCGCU--CGUug-GCGUGG- -5' |
|||||||
6473 | 5' | -62 | NC_001847.1 | + | 103299 | 0.66 | 0.651838 |
Target: 5'- --aGCGgCggCGGCgGGGCGGCCGCGCg -3' miRNA: 3'- gagCGCgGg-GCCG-CUCGUUGGCGUGg -5' |
|||||||
6473 | 5' | -62 | NC_001847.1 | + | 12692 | 0.66 | 0.651838 |
Target: 5'- -cUGCGCgUCGGCGGGguGCagGCagGCCg -3' miRNA: 3'- gaGCGCGgGGCCGCUCguUGg-CG--UGG- -5' |
|||||||
6473 | 5' | -62 | NC_001847.1 | + | 49942 | 0.66 | 0.651838 |
Target: 5'- uUgGaCGCCgUGGCGcGCGguGCCGCGCa -3' miRNA: 3'- gAgC-GCGGgGCCGCuCGU--UGGCGUGg -5' |
|||||||
6473 | 5' | -62 | NC_001847.1 | + | 71591 | 0.66 | 0.651838 |
Target: 5'- --aGUGCCgcCCGGCGccGGCccaGGCgGCGCCa -3' miRNA: 3'- gagCGCGG--GGCCGC--UCG---UUGgCGUGG- -5' |
|||||||
6473 | 5' | -62 | NC_001847.1 | + | 98972 | 0.66 | 0.651838 |
Target: 5'- -cCGCGCaccgCCGcaaGCGuugccuGCAGCCGCugCa -3' miRNA: 3'- gaGCGCGg---GGC---CGCu-----CGUUGGCGugG- -5' |
|||||||
6473 | 5' | -62 | NC_001847.1 | + | 80715 | 0.66 | 0.651838 |
Target: 5'- cCUCGUcucuGCCCgGGCcgccGAGgcCAACCGCGgCg -3' miRNA: 3'- -GAGCG----CGGGgCCG----CUC--GUUGGCGUgG- -5' |
|||||||
6473 | 5' | -62 | NC_001847.1 | + | 110191 | 0.66 | 0.651838 |
Target: 5'- -cUGCGCCaCCuGcCGGGCAagccGCCGCAgCu -3' miRNA: 3'- gaGCGCGG-GGcC-GCUCGU----UGGCGUgG- -5' |
|||||||
6473 | 5' | -62 | NC_001847.1 | + | 30708 | 0.66 | 0.651838 |
Target: 5'- -gCGCGCCgCGGUGcuGCcGCgGCGCa -3' miRNA: 3'- gaGCGCGGgGCCGCu-CGuUGgCGUGg -5' |
|||||||
6473 | 5' | -62 | NC_001847.1 | + | 43486 | 0.66 | 0.651838 |
Target: 5'- aUCGCGUCCCGcCGcGCcGCCGUcgAUCg -3' miRNA: 3'- gAGCGCGGGGCcGCuCGuUGGCG--UGG- -5' |
|||||||
6473 | 5' | -62 | NC_001847.1 | + | 133521 | 0.66 | 0.651838 |
Target: 5'- -gCGCGCCgCGGUGcuGCcGCgGCGCa -3' miRNA: 3'- gaGCGCGGgGCCGCu-CGuUGgCGUGg -5' |
|||||||
6473 | 5' | -62 | NC_001847.1 | + | 95294 | 0.66 | 0.651838 |
Target: 5'- gCUUGCgGCCgCUGGCGccuccaGGCG-CgGCGCCg -3' miRNA: 3'- -GAGCG-CGG-GGCCGC------UCGUuGgCGUGG- -5' |
|||||||
6473 | 5' | -62 | NC_001847.1 | + | 125059 | 0.66 | 0.651838 |
Target: 5'- gCUUGUGCuCCCGcGCGcGGCGGggcgcugggcCCGCGCg -3' miRNA: 3'- -GAGCGCG-GGGC-CGC-UCGUU----------GGCGUGg -5' |
|||||||
6473 | 5' | -62 | NC_001847.1 | + | 11661 | 0.66 | 0.650854 |
Target: 5'- gCUUGCggcgGCCCCaGcCGAGCccgcggcGGCCGuCGCCg -3' miRNA: 3'- -GAGCG----CGGGGcC-GCUCG-------UUGGC-GUGG- -5' |
<< Previous Page | Next Page >>
Note:
When operating RNAhybrid, the pipeline first calculates the perfect minimum free energy (Perfect mfe *) of a putative miRNA when the entire putative miRNA binds to a perfectly complementary target site, then it calculates the minimum free energy of RNA duplex (mfe of the miRNA/mRNA duplex), abbreviated as Rd_mfe. An alignment for which the Rd_mfe to its correspondent Perfect mfe ratio (R_P_ratio #) is more than 66% is regarded as a positive alignment as described by Krek et al. (21). The P_value is calculated by RNAhybrid.
Back To miRNA display CGI home