Results 101 - 120 of 627 are showing below:
Show page:
<< Previous Page | Next Page >>
ID | Location | Perfect MFE.* | RefSeq Acc. | strand | Start Position | R_P_ratio# | P value |
Predicted miRNA align pattern | |||||||
6491 | 3' | -55 | NC_001847.1 | + | 131192 | 0.72 | 0.603632 |
Target: 5'- ------gCCGcCGGAGacggcgcccccCCCGCCGCGGCg -3' miRNA: 3'- auauuuaGGC-GUCUC-----------GGGCGGCGUCG- -5' |
|||||||
6491 | 3' | -55 | NC_001847.1 | + | 9618 | 0.72 | 0.603632 |
Target: 5'- ------aCCGUAGcugcGCCCGCCGCcGCg -3' miRNA: 3'- auauuuaGGCGUCu---CGGGCGGCGuCG- -5' |
|||||||
6491 | 3' | -55 | NC_001847.1 | + | 96386 | 0.72 | 0.614136 |
Target: 5'- -----cUCCaGCAcGGGCCCGCCGCcacGCu -3' miRNA: 3'- auauuuAGG-CGU-CUCGGGCGGCGu--CG- -5' |
|||||||
6491 | 3' | -55 | NC_001847.1 | + | 120673 | 0.72 | 0.614136 |
Target: 5'- -----cUUCGguGAGCCCggagacccagagGCCGCGGCc -3' miRNA: 3'- auauuuAGGCguCUCGGG------------CGGCGUCG- -5' |
|||||||
6491 | 3' | -55 | NC_001847.1 | + | 82858 | 0.72 | 0.618343 |
Target: 5'- cGUAcGUCCgGCAcgugcucgcccgugcGGGCgCGCCGCAGCc -3' miRNA: 3'- aUAUuUAGG-CGU---------------CUCGgGCGGCGUCG- -5' |
|||||||
6491 | 3' | -55 | NC_001847.1 | + | 73134 | 0.72 | 0.582697 |
Target: 5'- cAUAcggCCGCAGGGCCCcgcGCCGCucuucgGGCc -3' miRNA: 3'- aUAUuuaGGCGUCUCGGG---CGGCG------UCG- -5' |
|||||||
6491 | 3' | -55 | NC_001847.1 | + | 12074 | 0.72 | 0.582697 |
Target: 5'- --cGAggCCGCGGAGCgCCGCggguccggcgccCGCGGCc -3' miRNA: 3'- auaUUuaGGCGUCUCG-GGCG------------GCGUCG- -5' |
|||||||
6491 | 3' | -55 | NC_001847.1 | + | 133069 | 0.73 | 0.510966 |
Target: 5'- ------cCCGCGGGGCgcucgccgccaCCGCUGCGGCg -3' miRNA: 3'- auauuuaGGCGUCUCG-----------GGCGGCGUCG- -5' |
|||||||
6491 | 3' | -55 | NC_001847.1 | + | 31881 | 0.73 | 0.521015 |
Target: 5'- ------gCCgGCGGAGCCCGUCGC-GCg -3' miRNA: 3'- auauuuaGG-CGUCUCGGGCGGCGuCG- -5' |
|||||||
6491 | 3' | -55 | NC_001847.1 | + | 85744 | 0.73 | 0.521015 |
Target: 5'- -----cUgCGCGGAGCCCGCCaugaCGGCa -3' miRNA: 3'- auauuuAgGCGUCUCGGGCGGc---GUCG- -5' |
|||||||
6491 | 3' | -55 | NC_001847.1 | + | 75776 | 0.73 | 0.521015 |
Target: 5'- gGUGAAcacggCCGCGG-GCUCGgCGCGGCg -3' miRNA: 3'- aUAUUUa----GGCGUCuCGGGCgGCGUCG- -5' |
|||||||
6491 | 3' | -55 | NC_001847.1 | + | 34455 | 0.73 | 0.531139 |
Target: 5'- --cGAggCCGCGGuGgCCGCCgGCGGCg -3' miRNA: 3'- auaUUuaGGCGUCuCgGGCGG-CGUCG- -5' |
|||||||
6491 | 3' | -55 | NC_001847.1 | + | 40169 | 0.73 | 0.531139 |
Target: 5'- --cAAAgCCGCGGGGgCUGCgCGCGGCg -3' miRNA: 3'- auaUUUaGGCGUCUCgGGCG-GCGUCG- -5' |
|||||||
6491 | 3' | -55 | NC_001847.1 | + | 104997 | 0.73 | 0.531139 |
Target: 5'- ---uGGUCCGC-GAGCCgCGCCGCgaccucggGGCg -3' miRNA: 3'- auauUUAGGCGuCUCGG-GCGGCG--------UCG- -5' |
|||||||
6491 | 3' | -55 | NC_001847.1 | + | 103702 | 0.73 | 0.541335 |
Target: 5'- ------cCCGCGccGGGgCCGCCGCGGCc -3' miRNA: 3'- auauuuaGGCGU--CUCgGGCGGCGUCG- -5' |
|||||||
6491 | 3' | -55 | NC_001847.1 | + | 104846 | 0.72 | 0.558812 |
Target: 5'- --gGGGUCCGCgaucugcgacauccAGGccacGCgCCGCCGCAGCg -3' miRNA: 3'- auaUUUAGGCG--------------UCU----CG-GGCGGCGUCG- -5' |
|||||||
6491 | 3' | -55 | NC_001847.1 | + | 24063 | 0.72 | 0.561913 |
Target: 5'- -----cUCgCGCAGccgggcccaGGCCCGCgGCAGCg -3' miRNA: 3'- auauuuAG-GCGUC---------UCGGGCGgCGUCG- -5' |
|||||||
6491 | 3' | -55 | NC_001847.1 | + | 54874 | 0.72 | 0.561913 |
Target: 5'- ------aCCGCuucaugaaGGAGCCCuGCUGCGGCa -3' miRNA: 3'- auauuuaGGCG--------UCUCGGG-CGGCGUCG- -5' |
|||||||
6491 | 3' | -55 | NC_001847.1 | + | 101380 | 0.72 | 0.572282 |
Target: 5'- ------gCCGCGGGGgCUGCCcGCGGCg -3' miRNA: 3'- auauuuaGGCGUCUCgGGCGG-CGUCG- -5' |
|||||||
6491 | 3' | -55 | NC_001847.1 | + | 83012 | 0.72 | 0.572282 |
Target: 5'- cGUcgGUCCGCuGGGGCgCCGCCggcccGCGGCc -3' miRNA: 3'- aUAuuUAGGCG-UCUCG-GGCGG-----CGUCG- -5' |
<< Previous Page | Next Page >>
Note:
When operating RNAhybrid, the pipeline first calculates the perfect minimum free energy (Perfect mfe *) of a putative miRNA when the entire putative miRNA binds to a perfectly complementary target site, then it calculates the minimum free energy of RNA duplex (mfe of the miRNA/mRNA duplex), abbreviated as Rd_mfe. An alignment for which the Rd_mfe to its correspondent Perfect mfe ratio (R_P_ratio #) is more than 66% is regarded as a positive alignment as described by Krek et al. (21). The P_value is calculated by RNAhybrid.
Back To miRNA display CGI home