Results 41 - 45 of 45 are showing below:
Show page:
<< Previous Page | Next Page >>
| ID | Location | Perfect MFE.* | RefSeq Acc. | strand | Start Position | R_P_ratio# |
P value
|
| Predicted miRNA align pattern | |||||||
| 6672 | 3' | -44.2 | NC_001847.1 | + | 82317 | 0.66 | 0.999998 |
|
Target: 5'- ----aAUGCgggcggGGUCGcCGGCGACGAg -3' miRNA: 3'- cuaaaUAUGaa----CCGGCaGUUGUUGCU- -5' |
|||||||
| 6672 | 3' | -44.2 | NC_001847.1 | + | 53869 | 0.66 | 0.999998 |
|
Target: 5'- ----gGUGCUguggggcGGCCGUCucuccggaaAGCAGCGGc -3' miRNA: 3'- cuaaaUAUGAa------CCGGCAG---------UUGUUGCU- -5' |
|||||||
| 6672 | 3' | -44.2 | NC_001847.1 | + | 95899 | 0.66 | 0.999998 |
|
Target: 5'- ------aGCUcgagaUGGCUGUCAGCGuCGAc -3' miRNA: 3'- cuaaauaUGA-----ACCGGCAGUUGUuGCU- -5' |
|||||||
| 6672 | 3' | -44.2 | NC_001847.1 | + | 54524 | 0.66 | 0.999999 |
|
Target: 5'- cGGUggg-GCggGGCCGUCcgggggcgcaGACGGCGGg -3' miRNA: 3'- -CUAaauaUGaaCCGGCAG----------UUGUUGCU- -5' |
|||||||
| 6672 | 3' | -44.2 | NC_001847.1 | + | 56727 | 0.66 | 0.999999 |
|
Target: 5'- ----------cGGCCGaugcUCAGCAACGAg -3' miRNA: 3'- cuaaauaugaaCCGGC----AGUUGUUGCU- -5' |
|||||||
<< Previous Page | Next Page >>
Note:
When operating RNAhybrid, the pipeline first calculates the perfect minimum free energy (Perfect mfe *) of a putative miRNA when the entire putative miRNA binds to a perfectly complementary target site, then it calculates the minimum free energy of RNA duplex (mfe of the miRNA/mRNA duplex), abbreviated as Rd_mfe. An alignment for which the Rd_mfe to its correspondent Perfect mfe ratio (R_P_ratio #) is more than 66% is regarded as a positive alignment as described by Krek et al. (21). The P_value is calculated by RNAhybrid.
Back To miRNA display CGI home