Results 121 - 123 of 123 are showing below:
Show page:
<< Previous Page | Next Page >>
ID | Location | Perfect MFE.* | RefSeq Acc. | strand | Start Position |
R_P_ratio![]() |
P value |
Predicted miRNA align pattern | |||||||
6731 | 3' | -52.6 | NC_001875.2 | + | 29701 | 0.66 | 0.979376 |
Target: 5'- uGCGCGagaaccgGAACUgcagauacuaaucauUGGcAUGUUGGCCaGCCu -3' miRNA: 3'- -CGCGCa------UUUGG---------------ACC-UGCAACUGG-CGG- -5' |
|||||||
6731 | 3' | -52.6 | NC_001875.2 | + | 109040 | 0.66 | 0.970243 |
Target: 5'- gGCGCGUcaAGAUugcgucuUUGGugGUUuccagcGCCGCCa -3' miRNA: 3'- -CGCGCA--UUUG-------GACCugCAAc-----UGGCGG- -5' |
|||||||
6731 | 3' | -52.6 | NC_001875.2 | + | 100886 | 0.66 | 0.980705 |
Target: 5'- aCGCGUAAGCCgguccGGGC----GCCGCa -3' miRNA: 3'- cGCGCAUUUGGa----CCUGcaacUGGCGg -5' |
<< Previous Page | Next Page >>
Note:
When operating RNAhybrid, the pipeline first calculates the perfect minimum free energy (Perfect mfe *) of a putative miRNA when the entire putative miRNA binds to a perfectly complementary target site, then it calculates the minimum free energy of RNA duplex (mfe of the miRNA/mRNA duplex), abbreviated as Rd_mfe. An alignment for which the Rd_mfe to its correspondent Perfect mfe ratio (R_P_ratio #) is more than 66% is regarded as a positive alignment as described by Krek et al. (21). The P_value is calculated by RNAhybrid.
Back To miRNA display CGI home