Results 101 - 120 of 173 are showing below:
Show page:
<< Previous Page | Next Page >>
ID | Location | Perfect MFE.* | RefSeq Acc. |
strand![]() |
Start Position | R_P_ratio# | P value |
Predicted miRNA align pattern | |||||||
6815 | 5' | -53 | NC_001875.2 | + | 19347 | 0.67 | 0.935596 |
Target: 5'- gGgcGUGGUGCGCggagCGUugGCCGacguaaaguuuaaaCCCa -3' miRNA: 3'- -CauUAUCGCGUGa---GCAugUGGCg-------------GGG- -5' |
|||||||
6815 | 5' | -53 | NC_001875.2 | + | 42583 | 0.67 | 0.937102 |
Target: 5'- ----cGGCGCACgcgcgCGUcagcucggcgcuggGCACCGCCa- -3' miRNA: 3'- cauuaUCGCGUGa----GCA--------------UGUGGCGGgg -5' |
|||||||
6815 | 5' | -53 | NC_001875.2 | + | 43714 | 0.67 | 0.938586 |
Target: 5'- ---uUGGCGcCGCUCa-GCACCGUgCCCg -3' miRNA: 3'- cauuAUCGC-GUGAGcaUGUGGCG-GGG- -5' |
|||||||
6815 | 5' | -53 | NC_001875.2 | + | 67082 | 0.67 | 0.938586 |
Target: 5'- cGUAAUcGGUGCACUUGUuguaccagaucGCuuCGCCCa -3' miRNA: 3'- -CAUUA-UCGCGUGAGCA-----------UGugGCGGGg -5' |
|||||||
6815 | 5' | -53 | NC_001875.2 | + | 31682 | 0.67 | 0.9479 |
Target: 5'- ----cAGCGUGCcggCGUGgACCGCCgCu -3' miRNA: 3'- cauuaUCGCGUGa--GCAUgUGGCGGgG- -5' |
|||||||
6815 | 5' | -53 | NC_001875.2 | + | 81346 | 0.67 | 0.9479 |
Target: 5'- ----cGGCGCGCUgGUgccgcGCGCaCGCgCCg -3' miRNA: 3'- cauuaUCGCGUGAgCA-----UGUG-GCGgGG- -5' |
|||||||
6815 | 5' | -53 | NC_001875.2 | + | 15173 | 0.67 | 0.943367 |
Target: 5'- ----cAGCaGCAuCUUGUACAUgGCCCa -3' miRNA: 3'- cauuaUCG-CGU-GAGCAUGUGgCGGGg -5' |
|||||||
6815 | 5' | -53 | NC_001875.2 | + | 11184 | 0.67 | 0.943367 |
Target: 5'- -aAGUuGCGCGC-CGUuguggagcacgACGCCGCgCCg -3' miRNA: 3'- caUUAuCGCGUGaGCA-----------UGUGGCGgGG- -5' |
|||||||
6815 | 5' | -53 | NC_001875.2 | + | 85252 | 0.67 | 0.928266 |
Target: 5'- -gGGUucCGCGCUCGgcgcggACACgagCGCCCCg -3' miRNA: 3'- caUUAucGCGUGAGCa-----UGUG---GCGGGG- -5' |
|||||||
6815 | 5' | -53 | NC_001875.2 | + | 48190 | 0.67 | 0.928266 |
Target: 5'- uGUGGUAuuGCGCACUUuggGCAaauGCCCCg -3' miRNA: 3'- -CAUUAU--CGCGUGAGca-UGUgg-CGGGG- -5' |
|||||||
6815 | 5' | -53 | NC_001875.2 | + | 58044 | 0.7 | 0.837289 |
Target: 5'- ----cGGCGCGCUgcCGUuccaGCCGCCgCCg -3' miRNA: 3'- cauuaUCGCGUGA--GCAug--UGGCGG-GG- -5' |
|||||||
6815 | 5' | -53 | NC_001875.2 | + | 62604 | 0.7 | 0.837289 |
Target: 5'- ----cAGCGCGC-CGUucgACGCCGCCg- -3' miRNA: 3'- cauuaUCGCGUGaGCA---UGUGGCGGgg -5' |
|||||||
6815 | 5' | -53 | NC_001875.2 | + | 119056 | 0.7 | 0.837289 |
Target: 5'- ----cGGCGUGCgcaUGUGCGCggCGCCCCg -3' miRNA: 3'- cauuaUCGCGUGa--GCAUGUG--GCGGGG- -5' |
|||||||
6815 | 5' | -53 | NC_001875.2 | + | 14942 | 0.7 | 0.84565 |
Target: 5'- -gGAUGGCGUugGCgUCGUGCACCucauaCCCUg -3' miRNA: 3'- caUUAUCGCG--UG-AGCAUGUGGc----GGGG- -5' |
|||||||
6815 | 5' | -53 | NC_001875.2 | + | 78314 | 0.7 | 0.84565 |
Target: 5'- cUGGUAGCGCACgaCGUGCGCCaaaaacacgcGCaCCg -3' miRNA: 3'- cAUUAUCGCGUGa-GCAUGUGG----------CGgGG- -5' |
|||||||
6815 | 5' | -53 | NC_001875.2 | + | 22726 | 0.7 | 0.853805 |
Target: 5'- --uGUGGCcUACUUGUGCGCCGgCCa -3' miRNA: 3'- cauUAUCGcGUGAGCAUGUGGCgGGg -5' |
|||||||
6815 | 5' | -53 | NC_001875.2 | + | 42702 | 0.69 | 0.861748 |
Target: 5'- ----cGGCGCGCgguuUCGUACGCaaggCGCaCCCg -3' miRNA: 3'- cauuaUCGCGUG----AGCAUGUG----GCG-GGG- -5' |
|||||||
6815 | 5' | -53 | NC_001875.2 | + | 17704 | 0.67 | 0.928266 |
Target: 5'- cGUAcaAGCuGCAUUUGUACGCCaGCCa- -3' miRNA: 3'- -CAUuaUCG-CGUGAGCAUGUGG-CGGgg -5' |
|||||||
6815 | 5' | -53 | NC_001875.2 | + | 110347 | 0.67 | 0.943367 |
Target: 5'- ----gGGCuGCACUCG-GCGUCGCCCg -3' miRNA: 3'- cauuaUCG-CGUGAGCaUGUGGCGGGg -5' |
|||||||
6815 | 5' | -53 | NC_001875.2 | + | 42493 | 0.67 | 0.928266 |
Target: 5'- -----cGCGCACgccgucguccgCGUGCGCCGCaaagcugaggCCCg -3' miRNA: 3'- cauuauCGCGUGa----------GCAUGUGGCG----------GGG- -5' |
<< Previous Page | Next Page >>
Note:
When operating RNAhybrid, the pipeline first calculates the perfect minimum free energy (Perfect mfe *) of a putative miRNA when the entire putative miRNA binds to a perfectly complementary target site, then it calculates the minimum free energy of RNA duplex (mfe of the miRNA/mRNA duplex), abbreviated as Rd_mfe. An alignment for which the Rd_mfe to its correspondent Perfect mfe ratio (R_P_ratio #) is more than 66% is regarded as a positive alignment as described by Krek et al. (21). The P_value is calculated by RNAhybrid.
Back To miRNA display CGI home