miRNA display CGI

Results 21 - 27 of 27 are showing below:
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ID	Location	Perfect MFE.*	RefSeq Acc.	strand	Start Position	R_P_ratio#	P value
	Predicted miRNA align pattern
7270	5'	-55.3	NC_001900.1	+	47675	0.66	0.65964
	Target:  5'- cUCCGAAGGuucgccacccccGGCCGACGAaacgucgcuGggCCUGAg -3' miRNA:   3'- cAGGCUUCU------------CCGGCUGUU---------CuaGGGCU- -5'
7270	5'	-55.3	NC_001900.1	+	33281	0.68	0.582341
	Target:  5'- cGUCaCGGAGGcucuGGUCGACcugggcguuGAUCCCGAc -3' miRNA:   3'- -CAG-GCUUCU----CCGGCUGuu-------CUAGGGCU- -5'
7270	5'	-55.3	NC_001900.1	+	34300	0.69	0.528179
	Target:  5'- aUCCGAAGA-GCCGA-GAGGUUCUGGa -3' miRNA:   3'- cAGGCUUCUcCGGCUgUUCUAGGGCU- -5'
7270	5'	-55.3	NC_001900.1	+	37376	0.69	0.475993
	Target:  5'- aUUCGGAGcAGGCCaaGACGAGGUUCCu- -3' miRNA:   3'- cAGGCUUC-UCCGG--CUGUUCUAGGGcu -5'
7270	5'	-55.3	NC_001900.1	+	31543	0.7	0.454845
	Target:  5'- cGUCCGggGGaucuaccacugauGGCCGAUcGGAUCCaGGu -3' miRNA:   3'- -CAGGCuuCU-------------CCGGCUGuUCUAGGgCU- -5'
7270	5'	-55.3	NC_001900.1	+	15610	0.7	0.436157
	Target:  5'- -cCCGGcgAGAGGCCGAacAGAUCCuCGu -3' miRNA:   3'- caGGCU--UCUCCGGCUguUCUAGG-GCu -5'
7270	5'	-55.3	NC_001900.1	+	38539	0.66	0.703461
	Target:  5'- -aCCGcuGA-GCUGuGCGGGAUCCCGAc -3' miRNA:   3'- caGGCuuCUcCGGC-UGUUCUAGGGCU- -5'

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Note:
      When operating RNAhybrid, the pipeline first calculates the perfect minimum free energy (Perfect mfe *) of a putative miRNA when the entire putative miRNA binds to a perfectly complementary target site, then it calculates the minimum free energy of RNA duplex (mfe of the miRNA/mRNA duplex), abbreviated as Rd_mfe. An alignment for which the Rd_mfe to its correspondent Perfect mfe ratio (R_P_ratio #) is more than 66% is regarded as a positive alignment as described by Krek et al. (21). The P_value is calculated by RNAhybrid.

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