Results 81 - 98 of 98 are showing below:
Show page:
<< Previous Page | Next Page >>
ID | Location | Perfect MFE.* | RefSeq Acc. | strand | Start Position | R_P_ratio# | P value |
Predicted miRNA align pattern | |||||||
7821 | 3' | -54.7 | NC_001973.1 | + | 160381 | 1.02 | 0.010712 |
Target: 5'- cAAGCUCGAGCUCGGCGGACGCGUAa -3' miRNA: 3'- aUUUGAGCUCGAGCCGCCUGCGCAUc -5' |
|||||||
7821 | 3' | -54.7 | NC_001973.1 | + | 160616 | 1.02 | 0.010712 |
Target: 5'- cAAACUCGAGCUCGGCGGACGCGUAa -3' miRNA: 3'- aUUUGAGCUCGAGCCGCCUGCGCAUc -5' |
|||||||
7821 | 3' | -54.7 | NC_001973.1 | + | 150952 | 1.03 | 0.010418 |
Target: 5'- cAGACUCGAGCUCGGCGGACGCGUAa -3' miRNA: 3'- aUUUGAGCUCGAGCCGCCUGCGCAUc -5' |
|||||||
7821 | 3' | -54.7 | NC_001973.1 | + | 21156 | 1.03 | 0.009582 |
Target: 5'- --cGCUCGAGCUCGGCGGACGCGUAGg -3' miRNA: 3'- auuUGAGCUCGAGCCGCCUGCGCAUC- -5' |
|||||||
7821 | 3' | -54.7 | NC_001973.1 | + | 151346 | 1.03 | 0.009853 |
Target: 5'- cAGAUUCGAGCUCGGCGGACGCGUAGg -3' miRNA: 3'- aUUUGAGCUCGAGCCGCCUGCGCAUC- -5' |
|||||||
7821 | 3' | -54.7 | NC_001973.1 | + | 127428 | 1.03 | 0.009582 |
Target: 5'- cUAAACUCGAGCUCGGCGGACGCGUAa -3' miRNA: 3'- -AUUUGAGCUCGAGCCGCCUGCGCAUc -5' |
|||||||
7821 | 3' | -54.7 | NC_001973.1 | + | 72117 | 1.04 | 0.008334 |
Target: 5'- -uAACUCGAGCUCGGCGGACGCGUAGg -3' miRNA: 3'- auUUGAGCUCGAGCCGCCUGCGCAUC- -5' |
|||||||
7821 | 3' | -54.7 | NC_001973.1 | + | 160695 | 1.04 | 0.008334 |
Target: 5'- -uAACUCGAGCUCGGCGGACGCGUAGg -3' miRNA: 3'- auUUGAGCUCGAGCCGCCUGCGCAUC- -5' |
|||||||
7821 | 3' | -54.7 | NC_001973.1 | + | 160793 | 1.06 | 0.006304 |
Target: 5'- cAAGCUCGAGCUCGGCGGGCGCGUAGg -3' miRNA: 3'- aUUUGAGCUCGAGCCGCCUGCGCAUC- -5' |
|||||||
7821 | 3' | -54.7 | NC_001973.1 | + | 130770 | 1.06 | 0.006304 |
Target: 5'- cAAACUCGAGCUCGGCGGGCGCGUAGg -3' miRNA: 3'- aUUUGAGCUCGAGCCGCCUGCGCAUC- -5' |
|||||||
7821 | 3' | -54.7 | NC_001973.1 | + | 151061 | 1.07 | 0.005184 |
Target: 5'- cAGACUCGAGCUCGGCGGACGCGUAGg -3' miRNA: 3'- aUUUGAGCUCGAGCCGCCUGCGCAUC- -5' |
|||||||
7821 | 3' | -54.7 | NC_001973.1 | + | 12107 | 1.07 | 0.005331 |
Target: 5'- cAAACUCGAGCUCGGCGGACGCGUAGg -3' miRNA: 3'- aUUUGAGCUCGAGCCGCCUGCGCAUC- -5' |
|||||||
7821 | 3' | -54.7 | NC_001973.1 | + | 12342 | 1.07 | 0.005331 |
Target: 5'- cAAACUCGAGCUCGGCGGACGCGUAGg -3' miRNA: 3'- aUUUGAGCUCGAGCCGCCUGCGCAUC- -5' |
|||||||
7821 | 3' | -54.7 | NC_001973.1 | + | 129298 | 1.07 | 0.005331 |
Target: 5'- cAAACUCGAGCUCGGCGGACGCGUAGg -3' miRNA: 3'- aUUUGAGCUCGAGCCGCCUGCGCAUC- -5' |
|||||||
7821 | 3' | -54.7 | NC_001973.1 | + | 21056 | 1.07 | 0.005637 |
Target: 5'- cGAGCUCGAGCUCGGCGGGCGCGUAGg -3' miRNA: 3'- aUUUGAGCUCGAGCCGCCUGCGCAUC- -5' |
|||||||
7821 | 3' | -54.7 | NC_001973.1 | + | 130867 | 1.08 | 0.004767 |
Target: 5'- cUAAACUCGAGCUCGGCGGACGCGUAGg -3' miRNA: 3'- -AUUUGAGCUCGAGCCGCCUGCGCAUC- -5' |
|||||||
7821 | 3' | -54.7 | NC_001973.1 | + | 130691 | 1.08 | 0.004767 |
Target: 5'- cUAAACUCGAGCUCGGCGGACGCGUAGg -3' miRNA: 3'- -AUUUGAGCUCGAGCCGCCUGCGCAUC- -5' |
|||||||
7821 | 3' | -54.7 | NC_001973.1 | + | 16354 | 1.08 | 0.004767 |
Target: 5'- cUAAACUCGAGCUCGGCGGACGCGUAGg -3' miRNA: 3'- -AUUUGAGCUCGAGCCGCCUGCGCAUC- -5' |
<< Previous Page | Next Page >>
Note:
When operating RNAhybrid, the pipeline first calculates the perfect minimum free energy (Perfect mfe *) of a putative miRNA when the entire putative miRNA binds to a perfectly complementary target site, then it calculates the minimum free energy of RNA duplex (mfe of the miRNA/mRNA duplex), abbreviated as Rd_mfe. An alignment for which the Rd_mfe to its correspondent Perfect mfe ratio (R_P_ratio #) is more than 66% is regarded as a positive alignment as described by Krek et al. (21). The P_value is calculated by RNAhybrid.
Back To miRNA display CGI home