Results 21 - 23 of 23 are showing below:
Show page:
<< Previous Page | Next Page >>
ID | Location | Perfect MFE.* | RefSeq Acc. | strand | Start Position | R_P_ratio# | P value |
Predicted miRNA align pattern | |||||||
7977 | 5' | -53.7 | NC_001973.1 | + | 55190 | 0.74 | 0.63898 |
Target: 5'- cCUGCA---UCAGCUUgaCGAGCGUGUu -3' miRNA: 3'- -GACGUucuAGUCGAGgaGCUCGCACG- -5' |
|||||||
7977 | 5' | -53.7 | NC_001973.1 | + | 143455 | 0.77 | 0.439217 |
Target: 5'- cCUGCAggcAGAUCAGCUCCUUGGG-GUaGUa -3' miRNA: 3'- -GACGU---UCUAGUCGAGGAGCUCgCA-CG- -5' |
|||||||
7977 | 5' | -53.7 | NC_001973.1 | + | 88816 | 0.78 | 0.409531 |
Target: 5'- aCUGCGAGGccggUCGcaaaccucgcacacGC-CCUCGAGCGUGCg -3' miRNA: 3'- -GACGUUCU----AGU--------------CGaGGAGCUCGCACG- -5' |
<< Previous Page | Next Page >>
Note:
When operating RNAhybrid, the pipeline first calculates the perfect minimum free energy (Perfect mfe *) of a putative miRNA when the entire putative miRNA binds to a perfectly complementary target site, then it calculates the minimum free energy of RNA duplex (mfe of the miRNA/mRNA duplex), abbreviated as Rd_mfe. An alignment for which the Rd_mfe to its correspondent Perfect mfe ratio (R_P_ratio #) is more than 66% is regarded as a positive alignment as described by Krek et al. (21). The P_value is calculated by RNAhybrid.
Back To miRNA display CGI home