miRNA display CGI

Results 41 - 47 of 47 are showing below:
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ID	Location	Perfect MFE.*	RefSeq Acc.	strand	Start Position	R_P_ratio#	P value
	Predicted miRNA align pattern
8176	3'	-55.6	NC_001978.2	+	36640	0.71	0.316186
	Target:  5'- aGGCGCUUGCCGAc-GCUgAGCGggaagCCCu -3' miRNA:   3'- -UCGCGGACGGCUaaCGG-UUGCaa---GGG- -5'
8176	3'	-55.6	NC_001978.2	+	36792	0.72	0.278375
	Target:  5'- gAGCcggaGCCUGCCGAcga-CGACGUUCCg -3' miRNA:   3'- -UCG----CGGACGGCUaacgGUUGCAAGGg -5'
8176	3'	-55.6	NC_001978.2	+	38654	0.72	0.278375
	Target:  5'- gGGCGCUccGCCGucccgaacGCCGACGUgCCCg -3' miRNA:   3'- -UCGCGGa-CGGCuaa-----CGGUUGCAaGGG- -5'
8176	3'	-55.6	NC_001978.2	+	38964	0.71	0.316186
	Target:  5'- aGGCGCCUuCCc---GCCGACGUaCCCg -3' miRNA:   3'- -UCGCGGAcGGcuaaCGGUUGCAaGGG- -5'
8176	3'	-55.6	NC_001978.2	+	39893	0.67	0.557582
	Target:  5'- cGCGCCUGCCGcgcgGUCuuCGUacagCUCu -3' miRNA:   3'- uCGCGGACGGCuaa-CGGuuGCAa---GGG- -5'
8176	3'	-55.6	NC_001978.2	+	41389	0.69	0.44168
	Target:  5'- cAGCGCUUGCaCG-UUGCCuucAACGUcuucgccgCCCa -3' miRNA:   3'- -UCGCGGACG-GCuAACGG---UUGCAa-------GGG- -5'
8176	3'	-55.6	NC_001978.2	+	41413	0.66	0.63573
	Target:  5'- gGGCGgCU-CCGAagUUGgCGGCGUgugCCCu -3' miRNA:   3'- -UCGCgGAcGGCU--AACgGUUGCAa--GGG- -5'

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Note:
      When operating RNAhybrid, the pipeline first calculates the perfect minimum free energy (Perfect mfe *) of a putative miRNA when the entire putative miRNA binds to a perfectly complementary target site, then it calculates the minimum free energy of RNA duplex (mfe of the miRNA/mRNA duplex), abbreviated as Rd_mfe. An alignment for which the Rd_mfe to its correspondent Perfect mfe ratio (R_P_ratio #) is more than 66% is regarded as a positive alignment as described by Krek et al. (21). The P_value is calculated by RNAhybrid.

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