Results 101 - 111 of 111 are showing below:
Show page:
<< Previous Page | Next Page >>
ID | Location | Perfect MFE.* | RefSeq Acc. | strand | Start Position | R_P_ratio# | P value |
Predicted miRNA align pattern | |||||||
8224 | 5' | -58.6 | NC_001978.2 | + | 28447 | 0.69 | 0.325753 |
Target: 5'- gGGCG-AGaCGCUGACCcagcgGACGgACGGCGg -3' miRNA: 3'- -CCGCuUCgGCGGCUGG-----CUGC-UGCUGC- -5' |
|||||||
8224 | 5' | -58.6 | NC_001978.2 | + | 32247 | 0.69 | 0.325753 |
Target: 5'- cGCGAAGCgcucaaCGUCGACCGggucACGACGcccaGCGg -3' miRNA: 3'- cCGCUUCG------GCGGCUGGC----UGCUGC----UGC- -5' |
|||||||
8224 | 5' | -58.6 | NC_001978.2 | + | 9216 | 0.69 | 0.333589 |
Target: 5'- cGGcCGGAGCga-CGGCCGACGACaauGGCGa -3' miRNA: 3'- -CC-GCUUCGgcgGCUGGCUGCUG---CUGC- -5' |
|||||||
8224 | 5' | -58.6 | NC_001978.2 | + | 22442 | 0.69 | 0.341562 |
Target: 5'- cGGCGcuGCCGUucugcacgUGACUGACGA-GACGu -3' miRNA: 3'- -CCGCuuCGGCG--------GCUGGCUGCUgCUGC- -5' |
|||||||
8224 | 5' | -58.6 | NC_001978.2 | + | 13084 | 0.69 | 0.349673 |
Target: 5'- cGGCGAGacgcugaacGCUGCCGGu--ACGGCGACGg -3' miRNA: 3'- -CCGCUU---------CGGCGGCUggcUGCUGCUGC- -5' |
|||||||
8224 | 5' | -58.6 | NC_001978.2 | + | 1559 | 0.69 | 0.357089 |
Target: 5'- cGCGAucauGCUuuaccaccugauaGCCGACCGG-GGCGACGc -3' miRNA: 3'- cCGCUu---CGG-------------CGGCUGGCUgCUGCUGC- -5' |
|||||||
8224 | 5' | -58.6 | NC_001978.2 | + | 32471 | 0.69 | 0.357919 |
Target: 5'- -aCGguGCCGaCuCGACCGACuGACGACc -3' miRNA: 3'- ccGCuuCGGC-G-GCUGGCUG-CUGCUGc -5' |
|||||||
8224 | 5' | -58.6 | NC_001978.2 | + | 7200 | 0.69 | 0.366301 |
Target: 5'- cGcCGGAGCCGguUCGcuuCUGACGGCGGCGu -3' miRNA: 3'- cC-GCUUCGGC--GGCu--GGCUGCUGCUGC- -5' |
|||||||
8224 | 5' | -58.6 | NC_001978.2 | + | 32155 | 0.68 | 0.374817 |
Target: 5'- -aCGAGGaaGCCGACCGG-GGCgGACGg -3' miRNA: 3'- ccGCUUCggCGGCUGGCUgCUG-CUGC- -5' |
|||||||
8224 | 5' | -58.6 | NC_001978.2 | + | 32017 | 0.68 | 0.383466 |
Target: 5'- aGGCGGAGCUucagGCUGAgCGGgGGCG-CGu -3' miRNA: 3'- -CCGCUUCGG----CGGCUgGCUgCUGCuGC- -5' |
|||||||
8224 | 5' | -58.6 | NC_001978.2 | + | 20386 | 0.67 | 0.457214 |
Target: 5'- cGGCGAaggccgaagucgAGUCGCgccgguCGGCCGACGuCGcCGa -3' miRNA: 3'- -CCGCU------------UCGGCG------GCUGGCUGCuGCuGC- -5' |
<< Previous Page | Next Page >>
Note:
When operating RNAhybrid, the pipeline first calculates the perfect minimum free energy (Perfect mfe *) of a putative miRNA when the entire putative miRNA binds to a perfectly complementary target site, then it calculates the minimum free energy of RNA duplex (mfe of the miRNA/mRNA duplex), abbreviated as Rd_mfe. An alignment for which the Rd_mfe to its correspondent Perfect mfe ratio (R_P_ratio #) is more than 66% is regarded as a positive alignment as described by Krek et al. (21). The P_value is calculated by RNAhybrid.
Back To miRNA display CGI home