Results 61 - 68 of 68 are showing below:
Show page:
<< Previous Page | Next Page >>
ID | Location | Perfect MFE.* | RefSeq Acc. | strand |
Start Position![]() |
R_P_ratio# | P value |
Predicted miRNA align pattern | |||||||
8488 | 3' | -43.8 | NC_002169.1 | + | 119420 | 1.05 | 0.066902 |
Target: 5'- -uUAGUACACGAUCUUUGCUUUCGUCc -3' miRNA: 3'- uuAUCAUGUGCUAGAAACGAAAGCAG- -5' |
|||||||
8488 | 3' | -43.8 | NC_002169.1 | + | 119516 | 0.9 | 0.406257 |
Target: 5'- -uUAGUACACGAUCUUUGCUUUUaUCg -3' miRNA: 3'- uuAUCAUGUGCUAGAAACGAAAGcAG- -5' |
|||||||
8488 | 3' | -43.8 | NC_002169.1 | + | 119602 | 1.04 | 0.071034 |
Target: 5'- --cAGUACACGAUCUUUGCUUUCGUCg -3' miRNA: 3'- uuaUCAUGUGCUAGAAACGAAAGCAG- -5' |
|||||||
8488 | 3' | -43.8 | NC_002169.1 | + | 119614 | 0.89 | 0.415941 |
Target: 5'- -uUAGUACAUGAUCUUUGCUUUCaUCg -3' miRNA: 3'- uuAUCAUGUGCUAGAAACGAAAGcAG- -5' |
|||||||
8488 | 3' | -43.8 | NC_002169.1 | + | 119794 | 1.04 | 0.07319 |
Target: 5'- -uUGGUACACGAUCUUUGCUUUCGUCc -3' miRNA: 3'- uuAUCAUGUGCUAGAAACGAAAGCAG- -5' |
|||||||
8488 | 3' | -43.8 | NC_002169.1 | + | 120039 | 1.05 | 0.066902 |
Target: 5'- -uUAGUACACGAUCUUUGCUUUCGUCc -3' miRNA: 3'- uuAUCAUGUGCUAGAAACGAAAGCAG- -5' |
|||||||
8488 | 3' | -43.8 | NC_002169.1 | + | 120234 | 0.95 | 0.225237 |
Target: 5'- uGUAaUACACGAUCUUUGCUUUCGUCg -3' miRNA: 3'- uUAUcAUGUGCUAGAAACGAAAGCAG- -5' |
|||||||
8488 | 3' | -43.8 | NC_002169.1 | + | 129653 | 0.69 | 0.999849 |
Target: 5'- cGAUGGUgcACACGAUCUcgucGCgUUCGUUc -3' miRNA: 3'- -UUAUCA--UGUGCUAGAaa--CGaAAGCAG- -5' |
<< Previous Page | Next Page >>
Note:
When operating RNAhybrid, the pipeline first calculates the perfect minimum free energy (Perfect mfe *) of a putative miRNA when the entire putative miRNA binds to a perfectly complementary target site, then it calculates the minimum free energy of RNA duplex (mfe of the miRNA/mRNA duplex), abbreviated as Rd_mfe. An alignment for which the Rd_mfe to its correspondent Perfect mfe ratio (R_P_ratio #) is more than 66% is regarded as a positive alignment as described by Krek et al. (21). The P_value is calculated by RNAhybrid.
Back To miRNA display CGI home