miRNA display CGI

Results 61 - 68 of 68 are showing below:
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ID	Location	Perfect MFE.*	RefSeq Acc.	strand	Start Position	R_P_ratio#	P value
	Predicted miRNA align pattern
8488	3'	-43.8	NC_002169.1	+	11636	0.8	0.862184
	Target:  5'- -cUAGUACAUGAUgUUUGCUUUCaUCg -3' miRNA:   3'- uuAUCAUGUGCUAgAAACGAAAGcAG- -5'
8488	3'	-43.8	NC_002169.1	+	52976	0.8	0.853574
	Target:  5'- -uUAGUACACcAUCUUUGCUUUCaUCg -3' miRNA:   3'- uuAUCAUGUGcUAGAAACGAAAGcAG- -5'
8488	3'	-43.8	NC_002169.1	+	105600	0.8	0.844714
	Target:  5'- ----aUACACaAUCUUUGCUUUCGUCg -3' miRNA:   3'- uuaucAUGUGcUAGAAACGAAAGCAG- -5'
8488	3'	-43.8	NC_002169.1	+	105694	0.81	0.835613
	Target:  5'- uGUAaUACACGAUCUUUGCUUUC-UCg -3' miRNA:   3'- uUAUcAUGUGCUAGAAACGAAAGcAG- -5'
8488	3'	-43.8	NC_002169.1	+	105026	0.81	0.835613
	Target:  5'- ----cUACuCGAUCUUUGCUUUCGUCc -3' miRNA:   3'- uuaucAUGuGCUAGAAACGAAAGCAG- -5'
8488	3'	-43.8	NC_002169.1	+	11361	0.88	0.498134
	Target:  5'- ----aUACAUGAUCUUUGCUUUCGUCc -3' miRNA:   3'- uuaucAUGUGCUAGAAACGAAAGCAG- -5'
8488	3'	-43.8	NC_002169.1	+	53233	0.88	0.498134
	Target:  5'- ----aUACAUGAUCUUUGCUUUCGUCc -3' miRNA:   3'- uuaucAUGUGCUAGAAACGAAAGCAG- -5'
8488	3'	-43.8	NC_002169.1	+	29673	0.66	0.999997
	Target:  5'- -----aACGCGAUCggUUGCcUUUUGUCu -3' miRNA:   3'- uuaucaUGUGCUAGa-AACG-AAAGCAG- -5'

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Note:
      When operating RNAhybrid, the pipeline first calculates the perfect minimum free energy (Perfect mfe *) of a putative miRNA when the entire putative miRNA binds to a perfectly complementary target site, then it calculates the minimum free energy of RNA duplex (mfe of the miRNA/mRNA duplex), abbreviated as Rd_mfe. An alignment for which the Rd_mfe to its correspondent Perfect mfe ratio (R_P_ratio #) is more than 66% is regarded as a positive alignment as described by Krek et al. (21). The P_value is calculated by RNAhybrid.

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