Results 41 - 60 of 64 are showing below:
Show page:
<< Previous Page | Next Page >>
ID | Location | Perfect MFE.* | RefSeq Acc. |
strand![]() |
Start Position | R_P_ratio# | P value |
Predicted miRNA align pattern | |||||||
8989 | 5' | -53.8 | NC_002512.2 | + | 217778 | 0.7 | 0.888748 |
Target: 5'- -cGUCGcCGggGUCgcGGCCGGCuGGCGg -3' miRNA: 3'- caCAGC-GCaaUAG--UCGGCCGuUCGUg -5' |
|||||||
8989 | 5' | -53.8 | NC_002512.2 | + | 95191 | 0.7 | 0.874698 |
Target: 5'- aUGUCG-Gg---CAGcCCGGCGAGCGCc -3' miRNA: 3'- cACAGCgCaauaGUC-GGCCGUUCGUG- -5' |
|||||||
8989 | 5' | -53.8 | NC_002512.2 | + | 217561 | 0.7 | 0.888067 |
Target: 5'- uUGUCGCGUUcgCgacggcgAGCCGGUccggcGGCGCc -3' miRNA: 3'- cACAGCGCAAuaG-------UCGGCCGu----UCGUG- -5' |
|||||||
8989 | 5' | -53.8 | NC_002512.2 | + | 172018 | 0.7 | 0.867345 |
Target: 5'- -cGUCGCcugGUcCGGCCGGCA-GCAUg -3' miRNA: 3'- caCAGCGcaaUA-GUCGGCCGUuCGUG- -5' |
|||||||
8989 | 5' | -53.8 | NC_002512.2 | + | 228581 | 0.71 | 0.85201 |
Target: 5'- ---cCGCGgucgUGUCGG-CGGCAGGCGCc -3' miRNA: 3'- cacaGCGCa---AUAGUCgGCCGUUCGUG- -5' |
|||||||
8989 | 5' | -53.8 | NC_002512.2 | + | 202828 | 0.73 | 0.745386 |
Target: 5'- cGUGUCGCaGUUgAUCGGCCaGUucAGCACg -3' miRNA: 3'- -CACAGCG-CAA-UAGUCGGcCGu-UCGUG- -5' |
|||||||
8989 | 5' | -53.8 | NC_002512.2 | + | 113646 | 0.68 | 0.953437 |
Target: 5'- -aGUCGUaGUUGgcgCGGCCGGCcgcgaggguGCGCg -3' miRNA: 3'- caCAGCG-CAAUa--GUCGGCCGuu-------CGUG- -5' |
|||||||
8989 | 5' | -53.8 | NC_002512.2 | + | 225006 | 0.67 | 0.956545 |
Target: 5'- -cGUCGCcgcuccucCAGCCGGCGccGCACg -3' miRNA: 3'- caCAGCGcaaua---GUCGGCCGUu-CGUG- -5' |
|||||||
8989 | 5' | -53.8 | NC_002512.2 | + | 184462 | 0.67 | 0.960936 |
Target: 5'- -aGUCGCcg---CGGCCGGCGccgccgucgAGCGCc -3' miRNA: 3'- caCAGCGcaauaGUCGGCCGU---------UCGUG- -5' |
|||||||
8989 | 5' | -53.8 | NC_002512.2 | + | 126482 | 0.66 | 0.975931 |
Target: 5'- -cGUCGCGUcgcccggAUCc-CCGGCGuugGGCGCg -3' miRNA: 3'- caCAGCGCAa------UAGucGGCCGU---UCGUG- -5' |
|||||||
8989 | 5' | -53.8 | NC_002512.2 | + | 198543 | 0.66 | 0.975931 |
Target: 5'- --cUCGUGgUcgUAGCCGGCcaGGGCGCu -3' miRNA: 3'- cacAGCGCaAuaGUCGGCCG--UUCGUG- -5' |
|||||||
8989 | 5' | -53.8 | NC_002512.2 | + | 223219 | 0.66 | 0.973338 |
Target: 5'- -cGgagCGCGUcc-CGGCCGGCucgguGCACu -3' miRNA: 3'- caCa--GCGCAauaGUCGGCCGuu---CGUG- -5' |
|||||||
8989 | 5' | -53.8 | NC_002512.2 | + | 210980 | 0.66 | 0.973338 |
Target: 5'- uGUGUCGCGccugcgUGGCCGcGCA-GUACg -3' miRNA: 3'- -CACAGCGCaaua--GUCGGC-CGUuCGUG- -5' |
|||||||
8989 | 5' | -53.8 | NC_002512.2 | + | 149256 | 0.66 | 0.973338 |
Target: 5'- -cGcCGCGga--CGGCCGGaCGGGUACg -3' miRNA: 3'- caCaGCGCaauaGUCGGCC-GUUCGUG- -5' |
|||||||
8989 | 5' | -53.8 | NC_002512.2 | + | 199917 | 0.66 | 0.973338 |
Target: 5'- cUGUCGUccGUUcgCGGCCGGCcgcCGCu -3' miRNA: 3'- cACAGCG--CAAuaGUCGGCCGuucGUG- -5' |
|||||||
8989 | 5' | -53.8 | NC_002512.2 | + | 35455 | 0.67 | 0.967555 |
Target: 5'- -gGUCGCagaGUUGUUGGCUGGCGAcguGUAUg -3' miRNA: 3'- caCAGCG---CAAUAGUCGGCCGUU---CGUG- -5' |
|||||||
8989 | 5' | -53.8 | NC_002512.2 | + | 163832 | 0.67 | 0.967555 |
Target: 5'- -aGUC-UGgg--CAGCuCGGCGAGCACa -3' miRNA: 3'- caCAGcGCaauaGUCG-GCCGUUCGUG- -5' |
|||||||
8989 | 5' | -53.8 | NC_002512.2 | + | 209138 | 0.67 | 0.964353 |
Target: 5'- -cGUCGUGggAgacgaCGGCGAGCACg -3' miRNA: 3'- caCAGCGCaaUagucgGCCGUUCGUG- -5' |
|||||||
8989 | 5' | -53.8 | NC_002512.2 | + | 174666 | 0.67 | 0.960936 |
Target: 5'- gGUGcCGCacgAUCAGCCGGUAccGGC-Cg -3' miRNA: 3'- -CACaGCGcaaUAGUCGGCCGU--UCGuG- -5' |
|||||||
8989 | 5' | -53.8 | NC_002512.2 | + | 111777 | 0.67 | 0.960936 |
Target: 5'- -cGUCaGCGaUA-CGGCCGGUccGCGCg -3' miRNA: 3'- caCAG-CGCaAUaGUCGGCCGuuCGUG- -5' |
<< Previous Page | Next Page >>
Note:
When operating RNAhybrid, the pipeline first calculates the perfect minimum free energy (Perfect mfe *) of a putative miRNA when the entire putative miRNA binds to a perfectly complementary target site, then it calculates the minimum free energy of RNA duplex (mfe of the miRNA/mRNA duplex), abbreviated as Rd_mfe. An alignment for which the Rd_mfe to its correspondent Perfect mfe ratio (R_P_ratio #) is more than 66% is regarded as a positive alignment as described by Krek et al. (21). The P_value is calculated by RNAhybrid.
Back To miRNA display CGI home