miRNA display CGI

Results 101 - 107 of 107 are showing below:
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ID	Location	Perfect MFE.*	RefSeq Acc.	strand	Start Position	R_P_ratio#	P value
	Predicted miRNA align pattern
9010	3'	-55.8	NC_002512.2	+	23025	0.69	0.869748
	Target:  5'- --aGCUCGGC-GCCGCCCCcgaagaagAUCGUg- -3' miRNA:   3'- gcaCGAGCCGuUGGUGGGG--------UAGUAgc -5'
9010	3'	-55.8	NC_002512.2	+	22133	0.67	0.935656
	Target:  5'- aCG-GCggCGGCu-CCACCCCGgagCGUCc -3' miRNA:   3'- -GCaCGa-GCCGuuGGUGGGGUa--GUAGc -5'
9010	3'	-55.8	NC_002512.2	+	21513	0.71	0.788979
	Target:  5'- --aGCgUCGG--GCCACCUCGUCGUCGa -3' miRNA:   3'- gcaCG-AGCCguUGGUGGGGUAGUAGC- -5'
9010	3'	-55.8	NC_002512.2	+	20855	0.66	0.960293
	Target:  5'- --cGCUCcgggacGCGGCCGCCCCGcUCAUgGc -3' miRNA:   3'- gcaCGAGc-----CGUUGGUGGGGU-AGUAgC- -5'
9010	3'	-55.8	NC_002512.2	+	19367	0.72	0.743145
	Target:  5'- uCGgggGCUCGGCGGCCucGCgCUcgCGUCGg -3' miRNA:   3'- -GCa--CGAGCCGUUGG--UGgGGuaGUAGC- -5'
9010	3'	-55.8	NC_002512.2	+	18693	0.68	0.890336
	Target:  5'- uCGUGggCGGCGGgCACCCCGagCAgggCGg -3' miRNA:   3'- -GCACgaGCCGUUgGUGGGGUa-GUa--GC- -5'
9010	3'	-55.8	NC_002512.2	+	11929	0.66	0.954487
	Target:  5'- --cGCUCGGCAAauaggcagucguuccCCGCCCCG--GUCc -3' miRNA:   3'- gcaCGAGCCGUU---------------GGUGGGGUagUAGc -5'

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Note:
      When operating RNAhybrid, the pipeline first calculates the perfect minimum free energy (Perfect mfe *) of a putative miRNA when the entire putative miRNA binds to a perfectly complementary target site, then it calculates the minimum free energy of RNA duplex (mfe of the miRNA/mRNA duplex), abbreviated as Rd_mfe. An alignment for which the Rd_mfe to its correspondent Perfect mfe ratio (R_P_ratio #) is more than 66% is regarded as a positive alignment as described by Krek et al. (21). The P_value is calculated by RNAhybrid.

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