Results 101 - 120 of 327 are showing below:
Show page:
<< Previous Page | Next Page >>
ID | Location | Perfect MFE.* | RefSeq Acc. | strand | Start Position |
R_P_ratio![]() |
P value |
Predicted miRNA align pattern | |||||||
9085 | 3' | -64 | NC_002512.2 | + | 202131 | 0.67 | 0.623292 |
Target: 5'- uGGCGccggucucGGCCGCCGCCgCGG--GGCGGGu -3' miRNA: 3'- uUCGC--------UCGGCGGCGG-GCUggCUGCCU- -5' |
|||||||
9085 | 3' | -64 | NC_002512.2 | + | 7224 | 0.67 | 0.623292 |
Target: 5'- --uCGAGgCGCCccucgGCCCGGCCGgccgucgcgGCGGAg -3' miRNA: 3'- uucGCUCgGCGG-----CGGGCUGGC---------UGCCU- -5' |
|||||||
9085 | 3' | -64 | NC_002512.2 | + | 124796 | 0.67 | 0.623292 |
Target: 5'- cGGgGAGacaCGUCGaCCCGACCGcCGGc -3' miRNA: 3'- uUCgCUCg--GCGGC-GGGCUGGCuGCCu -5' |
|||||||
9085 | 3' | -64 | NC_002512.2 | + | 42242 | 0.67 | 0.623292 |
Target: 5'- -cGUG-GCCGCCGCCCuccauGGCUGG-GGAg -3' miRNA: 3'- uuCGCuCGGCGGCGGG-----CUGGCUgCCU- -5' |
|||||||
9085 | 3' | -64 | NC_002512.2 | + | 56461 | 0.67 | 0.623292 |
Target: 5'- cGAGaCGAGgCGCgCGaUgCGAUCGACGGAg -3' miRNA: 3'- -UUC-GCUCgGCG-GC-GgGCUGGCUGCCU- -5' |
|||||||
9085 | 3' | -64 | NC_002512.2 | + | 141439 | 0.67 | 0.613837 |
Target: 5'- --aCGAGCCcCCGCUCGGuCCGACGu- -3' miRNA: 3'- uucGCUCGGcGGCGGGCU-GGCUGCcu -5' |
|||||||
9085 | 3' | -64 | NC_002512.2 | + | 111797 | 0.67 | 0.611002 |
Target: 5'- -cGCGcGGUCGCCGCCgGcGCCGgagccgcccccuccGCGGAg -3' miRNA: 3'- uuCGC-UCGGCGGCGGgC-UGGC--------------UGCCU- -5' |
|||||||
9085 | 3' | -64 | NC_002512.2 | + | 129753 | 0.67 | 0.604393 |
Target: 5'- cGGUccGCCGCCGuCCaCGACggUGACGGAg -3' miRNA: 3'- uUCGcuCGGCGGC-GG-GCUG--GCUGCCU- -5' |
|||||||
9085 | 3' | -64 | NC_002512.2 | + | 220118 | 0.67 | 0.594967 |
Target: 5'- -cGUGAGCCGCCaCgCgGGgCGGCGGGu -3' miRNA: 3'- uuCGCUCGGCGGcG-GgCUgGCUGCCU- -5' |
|||||||
9085 | 3' | -64 | NC_002512.2 | + | 184539 | 0.67 | 0.594967 |
Target: 5'- gGGGUcAGCCgGCgGCgCgGGCCGGCGGAc -3' miRNA: 3'- -UUCGcUCGG-CGgCG-GgCUGGCUGCCU- -5' |
|||||||
9085 | 3' | -64 | NC_002512.2 | + | 225476 | 0.67 | 0.594967 |
Target: 5'- cAGC-AGCCGCCG-UCGACCGcgaucuACGGGg -3' miRNA: 3'- uUCGcUCGGCGGCgGGCUGGC------UGCCU- -5' |
|||||||
9085 | 3' | -64 | NC_002512.2 | + | 130073 | 0.67 | 0.594967 |
Target: 5'- cGGUG-GCCGCCaGCUCGuaguacCCGACGGc -3' miRNA: 3'- uUCGCuCGGCGG-CGGGCu-----GGCUGCCu -5' |
|||||||
9085 | 3' | -64 | NC_002512.2 | + | 94677 | 0.67 | 0.604393 |
Target: 5'- cGGgGGGCCcCCcgGCCCG-CUGGCGGAc -3' miRNA: 3'- uUCgCUCGGcGG--CGGGCuGGCUGCCU- -5' |
|||||||
9085 | 3' | -64 | NC_002512.2 | + | 190134 | 0.67 | 0.604393 |
Target: 5'- -uGCGuGCUGCuCGCCUGGCCcacCGGGu -3' miRNA: 3'- uuCGCuCGGCG-GCGGGCUGGcu-GCCU- -5' |
|||||||
9085 | 3' | -64 | NC_002512.2 | + | 111094 | 0.67 | 0.604393 |
Target: 5'- gGGGCccacAGCUcCCGCCCGG-CGGCGGAg -3' miRNA: 3'- -UUCGc---UCGGcGGCGGGCUgGCUGCCU- -5' |
|||||||
9085 | 3' | -64 | NC_002512.2 | + | 145340 | 0.67 | 0.604393 |
Target: 5'- cGAGCGccucGCCgcGCCGCCCGacGCCGGCu-- -3' miRNA: 3'- -UUCGCu---CGG--CGGCGGGC--UGGCUGccu -5' |
|||||||
9085 | 3' | -64 | NC_002512.2 | + | 157153 | 0.67 | 0.604393 |
Target: 5'- gGGGCGGGCgGCgGgCCGGgCGGCGuGGg -3' miRNA: 3'- -UUCGCUCGgCGgCgGGCUgGCUGC-CU- -5' |
|||||||
9085 | 3' | -64 | NC_002512.2 | + | 170055 | 0.67 | 0.604393 |
Target: 5'- uGGCc-GCCGCCGCCgCGGCCGccuucuUGGGc -3' miRNA: 3'- uUCGcuCGGCGGCGG-GCUGGCu-----GCCU- -5' |
|||||||
9085 | 3' | -64 | NC_002512.2 | + | 200789 | 0.67 | 0.604393 |
Target: 5'- uGGCc-GCCGCCGCCgaaGACgaGGCGGGa -3' miRNA: 3'- uUCGcuCGGCGGCGGg--CUGg-CUGCCU- -5' |
|||||||
9085 | 3' | -64 | NC_002512.2 | + | 128772 | 0.67 | 0.604393 |
Target: 5'- -cGCGAGCgcaCGCCGCgCCGcgcGCUGGcCGGGg -3' miRNA: 3'- uuCGCUCG---GCGGCG-GGC---UGGCU-GCCU- -5' |
<< Previous Page | Next Page >>
Note:
When operating RNAhybrid, the pipeline first calculates the perfect minimum free energy (Perfect mfe *) of a putative miRNA when the entire putative miRNA binds to a perfectly complementary target site, then it calculates the minimum free energy of RNA duplex (mfe of the miRNA/mRNA duplex), abbreviated as Rd_mfe. An alignment for which the Rd_mfe to its correspondent Perfect mfe ratio (R_P_ratio #) is more than 66% is regarded as a positive alignment as described by Krek et al. (21). The P_value is calculated by RNAhybrid.
Back To miRNA display CGI home