miRNA display CGI

Results 21 - 25 of 25 are showing below:
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ID	Location	Perfect MFE.*	RefSeq Acc.	strand	Start Position	R_P_ratio#	P value
	Predicted miRNA align pattern
9169	3'	-50.3	NC_002512.2	+	120058	0.72	0.939807
	Target:  5'- cCUgCCGCcccaGGGGACUCCCCUCAGAc -3' miRNA:   3'- aGA-GGUGuua-UUUCUGGGGGGAGUUU- -5'
9169	3'	-50.3	NC_002512.2	+	215811	0.73	0.912456
	Target:  5'- aCUCUACGGggccGGGGACUCCCCUCc-- -3' miRNA:   3'- aGAGGUGUUa---UUUCUGGGGGGAGuuu -5'
9169	3'	-50.3	NC_002512.2	+	47155	0.73	0.893038
	Target:  5'- cCUUUACuGUAuuuGGGCCCCCCUCGu- -3' miRNA:   3'- aGAGGUGuUAUu--UCUGGGGGGAGUuu -5'
9169	3'	-50.3	NC_002512.2	+	48398	0.75	0.831023
	Target:  5'- uUCUCUAUuuGAUAGacacGGACCCCCCUUAu- -3' miRNA:   3'- -AGAGGUG--UUAUU----UCUGGGGGGAGUuu -5'
9169	3'	-50.3	NC_002512.2	+	52457	1.08	0.015715
	Target:  5'- aUCUCCACAAUAAAGACCCCCCUCAAAg -3' miRNA:   3'- -AGAGGUGUUAUUUCUGGGGGGAGUUU- -5'

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Note:
      When operating RNAhybrid, the pipeline first calculates the perfect minimum free energy (Perfect mfe *) of a putative miRNA when the entire putative miRNA binds to a perfectly complementary target site, then it calculates the minimum free energy of RNA duplex (mfe of the miRNA/mRNA duplex), abbreviated as Rd_mfe. An alignment for which the Rd_mfe to its correspondent Perfect mfe ratio (R_P_ratio #) is more than 66% is regarded as a positive alignment as described by Krek et al. (21). The P_value is calculated by RNAhybrid.

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