Results 81 - 87 of 87 are showing below:
Show page:
<< Previous Page | Next Page >>
| ID | Location | Perfect MFE.* | RefSeq Acc. | strand | Start Position |
R_P_ratio #
|
P value |
| Predicted miRNA align pattern | |||||||
| 9234 | 5' | -55.1 | NC_002512.2 | + | 72880 | 0.73 | 0.694298 |
|
Target: 5'- ---gUUGUCGCGGGGCUCGggcccgaagcgGCGGCCg -3' miRNA: 3'- gaagAACGGCGUCCUGAGC-----------UGCUGGa -5' |
|||||||
| 9234 | 5' | -55.1 | NC_002512.2 | + | 194387 | 0.74 | 0.674483 |
|
Target: 5'- -----cGCUGCAGGACUUcugGACGGCCg -3' miRNA: 3'- gaagaaCGGCGUCCUGAG---CUGCUGGa -5' |
|||||||
| 9234 | 5' | -55.1 | NC_002512.2 | + | 130145 | 0.74 | 0.664522 |
|
Target: 5'- -gUCgcgGCCGCGGGGCcCGGCGGCg- -3' miRNA: 3'- gaAGaa-CGGCGUCCUGaGCUGCUGga -5' |
|||||||
| 9234 | 5' | -55.1 | NC_002512.2 | + | 102503 | 0.75 | 0.614496 |
|
Target: 5'- gUUCccGCCGCGGGAgUCG-CGGCCg -3' miRNA: 3'- gAAGaaCGGCGUCCUgAGCuGCUGGa -5' |
|||||||
| 9234 | 5' | -55.1 | NC_002512.2 | + | 146177 | 0.77 | 0.500968 |
|
Target: 5'- ----cUGCCGCGcggcacggucgcccuGGGCUCGACGACCg -3' miRNA: 3'- gaagaACGGCGU---------------CCUGAGCUGCUGGa -5' |
|||||||
| 9234 | 5' | -55.1 | NC_002512.2 | + | 12775 | 0.82 | 0.262005 |
|
Target: 5'- -----cGCCGCAGGACUCGGCGGCg- -3' miRNA: 3'- gaagaaCGGCGUCCUGAGCUGCUGga -5' |
|||||||
| 9234 | 5' | -55.1 | NC_002512.2 | + | 41283 | 1.08 | 0.006174 |
|
Target: 5'- gCUUCUUGCCGCAGGACUCGACGACCUg -3' miRNA: 3'- -GAAGAACGGCGUCCUGAGCUGCUGGA- -5' |
|||||||
<< Previous Page | Next Page >>
Note:
When operating RNAhybrid, the pipeline first calculates the perfect minimum free energy (Perfect mfe *) of a putative miRNA when the entire putative miRNA binds to a perfectly complementary target site, then it calculates the minimum free energy of RNA duplex (mfe of the miRNA/mRNA duplex), abbreviated as Rd_mfe. An alignment for which the Rd_mfe to its correspondent Perfect mfe ratio (R_P_ratio #) is more than 66% is regarded as a positive alignment as described by Krek et al. (21). The P_value is calculated by RNAhybrid.
Back To miRNA display CGI home