miRNA display CGI

Results 81 - 87 of 87 are showing below:
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ID	Location	Perfect MFE.*	RefSeq Acc.	strand	Start Position	R_P_ratio#	P value
	Predicted miRNA align pattern
9234	5'	-55.1	NC_002512.2	+	20271	0.68	0.926466
	Target:  5'- -gUCcgGCCGCAGGucguacauCUCGugGACg- -3' miRNA:   3'- gaAGaaCGGCGUCCu-------GAGCugCUGga -5'
9234	5'	-55.1	NC_002512.2	+	112192	0.68	0.909763
	Target:  5'- -----cGCCGCAGGugcgccacgcaGCUCGuCGACCc -3' miRNA:   3'- gaagaaCGGCGUCC-----------UGAGCuGCUGGa -5'
9234	5'	-55.1	NC_002512.2	+	81808	0.69	0.903742
	Target:  5'- -----cGCCGgGGGACg-GACGACCg -3' miRNA:   3'- gaagaaCGGCgUCCUGagCUGCUGGa -5'
9234	5'	-55.1	NC_002512.2	+	124857	0.69	0.903742
	Target:  5'- uUUC-UGCuacaugaccugCGCGGGGCUCGACGcGCCc -3' miRNA:   3'- gAAGaACG-----------GCGUCCUGAGCUGC-UGGa -5'
9234	5'	-55.1	NC_002512.2	+	75090	0.69	0.897496
	Target:  5'- -----cGCCGUuucgGGGGCUCGACGucGCCg -3' miRNA:   3'- gaagaaCGGCG----UCCUGAGCUGC--UGGa -5'
9234	5'	-55.1	NC_002512.2	+	44309	0.7	0.839918
	Target:  5'- gUUCUgcaugcUGCCGUuccAGGucccCUCGACGGCCa -3' miRNA:   3'- gAAGA------ACGGCG---UCCu---GAGCUGCUGGa -5'
9234	5'	-55.1	NC_002512.2	+	41283	1.08	0.006174
	Target:  5'- gCUUCUUGCCGCAGGACUCGACGACCUg -3' miRNA:   3'- -GAAGAACGGCGUCCUGAGCUGCUGGA- -5'

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Note:
      When operating RNAhybrid, the pipeline first calculates the perfect minimum free energy (Perfect mfe *) of a putative miRNA when the entire putative miRNA binds to a perfectly complementary target site, then it calculates the minimum free energy of RNA duplex (mfe of the miRNA/mRNA duplex), abbreviated as Rd_mfe. An alignment for which the Rd_mfe to its correspondent Perfect mfe ratio (R_P_ratio #) is more than 66% is regarded as a positive alignment as described by Krek et al. (21). The P_value is calculated by RNAhybrid.

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