Results 21 - 31 of 31 are showing below:
Show page:
<< Previous Page | Next Page >>
| ID | Location | Perfect MFE.* | RefSeq Acc. | strand | Start Position | R_P_ratio# |
P value
|
| Predicted miRNA align pattern | |||||||
| 9287 | 5' | -58.3 | NC_002512.2 | + | 77490 | 0.92 | 0.035535 |
|
Target: 5'- aUCGCCCUGUGGGCU-CCCCCAGAUGUc -3' miRNA: 3'- -GGUGGGACACCCGAgGGGGGUUUACA- -5' |
|||||||
| 9287 | 5' | -58.3 | NC_002512.2 | + | 153931 | 1.01 | 0.009998 |
|
Target: 5'- cCCACCCUGUGGGCUCCCCCCAAAa-- -3' miRNA: 3'- -GGUGGGACACCCGAGGGGGGUUUaca -5' |
|||||||
| 9287 | 5' | -58.3 | NC_002512.2 | + | 78193 | 1.05 | 0.005007 |
|
Target: 5'- aUCACCCUGUGGGCUCCCCCCAAAUGUc -3' miRNA: 3'- -GGUGGGACACCCGAGGGGGGUUUACA- -5' |
|||||||
| 9287 | 5' | -58.3 | NC_002512.2 | + | 78273 | 1.05 | 0.005007 |
|
Target: 5'- aUCACCCUGUGGGCUCCCCCCAAAUGUc -3' miRNA: 3'- -GGUGGGACACCCGAGGGGGGUUUACA- -5' |
|||||||
| 9287 | 5' | -58.3 | NC_002512.2 | + | 170070 | 1.09 | 0.002939 |
|
Target: 5'- aCCACCCUGUGGGCUCCCCCCAAAUGUc -3' miRNA: 3'- -GGUGGGACACCCGAGGGGGGUUUACA- -5' |
|||||||
| 9287 | 5' | -58.3 | NC_002512.2 | + | 77879 | 1.09 | 0.002939 |
|
Target: 5'- aCCACCCUGUGGGCUCCCCCCAAAUGUc -3' miRNA: 3'- -GGUGGGACACCCGAGGGGGGUUUACA- -5' |
|||||||
| 9287 | 5' | -58.3 | NC_002512.2 | + | 78113 | 1.09 | 0.002939 |
|
Target: 5'- aCCACCCUGUGGGCUCCCCCCAAAUGUc -3' miRNA: 3'- -GGUGGGACACCCGAGGGGGGUUUACA- -5' |
|||||||
| 9287 | 5' | -58.3 | NC_002512.2 | + | 77649 | 1.09 | 0.002939 |
|
Target: 5'- aCCACCCUGUGGGCUCCCCCCAAAUGUc -3' miRNA: 3'- -GGUGGGACACCCGAGGGGGGUUUACA- -5' |
|||||||
| 9287 | 5' | -58.3 | NC_002512.2 | + | 77569 | 1.09 | 0.002939 |
|
Target: 5'- aCCACCCUGUGGGCUCCCCCCAAAUGUc -3' miRNA: 3'- -GGUGGGACACCCGAGGGGGGUUUACA- -5' |
|||||||
| 9287 | 5' | -58.3 | NC_002512.2 | + | 78035 | 1.09 | 0.002939 |
|
Target: 5'- aCCACCCUGUGGGCUCCCCCCAAAUGUc -3' miRNA: 3'- -GGUGGGACACCCGAGGGGGGUUUACA- -5' |
|||||||
| 9287 | 5' | -58.3 | NC_002512.2 | + | 77957 | 1.09 | 0.002939 |
|
Target: 5'- aCCACCCUGUGGGCUCCCCCCAAAUGUc -3' miRNA: 3'- -GGUGGGACACCCGAGGGGGGUUUACA- -5' |
|||||||
<< Previous Page | Next Page >>
Note:
When operating RNAhybrid, the pipeline first calculates the perfect minimum free energy (Perfect mfe *) of a putative miRNA when the entire putative miRNA binds to a perfectly complementary target site, then it calculates the minimum free energy of RNA duplex (mfe of the miRNA/mRNA duplex), abbreviated as Rd_mfe. An alignment for which the Rd_mfe to its correspondent Perfect mfe ratio (R_P_ratio #) is more than 66% is regarded as a positive alignment as described by Krek et al. (21). The P_value is calculated by RNAhybrid.
Back To miRNA display CGI home