miRNA display CGI

Results 41 - 47 of 47 are showing below:
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ID	Location	Perfect MFE.*	RefSeq Acc.	strand	Start Position	R_P_ratio#	P value
	Predicted miRNA align pattern
9378	3'	-55.1	NC_002512.2	+	102350	0.66	0.965912
	Target:  5'- cGggUCcGGGcGUCGGUCGUCCggaggUCCu -3' miRNA:   3'- uCuuAGuUCC-CGGCUAGCGGGag---AGG- -5'
9378	3'	-55.1	NC_002512.2	+	96342	0.69	0.881058
	Target:  5'- uGGAAgagCAcgcGGGGCgugaggCGAUCGUCCUCcCCg -3' miRNA:   3'- -UCUUa--GU---UCCCG------GCUAGCGGGAGaGG- -5'
9378	3'	-55.1	NC_002512.2	+	95154	0.66	0.976871
	Target:  5'- cGggUCGAGGaCCGGa-GCCUUCcCCa -3' miRNA:   3'- uCuuAGUUCCcGGCUagCGGGAGaGG- -5'
9378	3'	-55.1	NC_002512.2	+	81807	0.72	0.757451
	Target:  5'- ----aCGAGGGCCGAcgCGCCgCgaggUCUCCg -3' miRNA:   3'- ucuuaGUUCCCGGCUa-GCGG-G----AGAGG- -5'
9378	3'	-55.1	NC_002512.2	+	79234	0.68	0.92385
	Target:  5'- gAGAA-CGAGaGGCCGucggccgcCGgCCUCUCCc -3' miRNA:   3'- -UCUUaGUUC-CCGGCua------GCgGGAGAGG- -5'
9378	3'	-55.1	NC_002512.2	+	55061	0.69	0.881058
	Target:  5'- gAGAGUCAucuGGGCgCGAccgcUCGCCCgaUUUCg -3' miRNA:   3'- -UCUUAGUu--CCCG-GCU----AGCGGG--AGAGg -5'
9378	3'	-55.1	NC_002512.2	+	44207	0.74	0.6403
	Target:  5'- uGGAcgCGGGGGaCUGAUCGCCagaUCCg -3' miRNA:   3'- -UCUuaGUUCCC-GGCUAGCGGgagAGG- -5'

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Note:
      When operating RNAhybrid, the pipeline first calculates the perfect minimum free energy (Perfect mfe *) of a putative miRNA when the entire putative miRNA binds to a perfectly complementary target site, then it calculates the minimum free energy of RNA duplex (mfe of the miRNA/mRNA duplex), abbreviated as Rd_mfe. An alignment for which the Rd_mfe to its correspondent Perfect mfe ratio (R_P_ratio #) is more than 66% is regarded as a positive alignment as described by Krek et al. (21). The P_value is calculated by RNAhybrid.

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