miRNA display CGI

Results 101 - 108 of 108 are showing below:
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ID	Location	Perfect MFE.*	RefSeq Acc.	strand	Start Position	R_P_ratio#	P value
	Predicted miRNA align pattern
9385	3'	-53.2	NC_002512.2	+	119273	0.74	0.789053
	Target:  5'- gCUGGCCCuGgAGGACAGcaGCAuGCUGCu -3' miRNA:   3'- gGACUGGGcUgUUCUGUC--UGU-CGACG- -5'
9385	3'	-53.2	NC_002512.2	+	113222	0.75	0.72313
	Target:  5'- uCCUcGCCCGGgGAGACGGGCAcgGCaGCa -3' miRNA:   3'- -GGAcUGGGCUgUUCUGUCUGU--CGaCG- -5'
9385	3'	-53.2	NC_002512.2	+	228037	0.76	0.673581
	Target:  5'- aCCgGACggCGGCGAGACgcccgcGGACGGCUGCg -3' miRNA:   3'- -GGaCUGg-GCUGUUCUG------UCUGUCGACG- -5'
9385	3'	-53.2	NC_002512.2	+	101765	0.76	0.683591
	Target:  5'- gCCUGACCuuCGGCGAGACGGcgccguccucGCGGCggaGCg -3' miRNA:   3'- -GGACUGG--GCUGUUCUGUC----------UGUCGa--CG- -5'
9385	3'	-53.2	NC_002512.2	+	207594	0.78	0.533486
	Target:  5'- cCCUGGCCUG-CGAcGGCGG-CGGCUGCu -3' miRNA:   3'- -GGACUGGGCuGUU-CUGUCuGUCGACG- -5'
9385	3'	-53.2	NC_002512.2	+	123155	0.78	0.533486
	Target:  5'- gCCgGGgCCGAgGAGGCGGACAGgaGCg -3' miRNA:   3'- -GGaCUgGGCUgUUCUGUCUGUCgaCG- -5'
9385	3'	-53.2	NC_002512.2	+	119320	0.78	0.533486
	Target:  5'- uCCUGACCCGGCAGGACcucccgcGCGGggGCg -3' miRNA:   3'- -GGACUGGGCUGUUCUGuc-----UGUCgaCG- -5'
9385	3'	-53.2	NC_002512.2	+	209625	0.79	0.504514
	Target:  5'- aCCUGcgGCCgGACgAGGACGacGACGGCUGCg -3' miRNA:   3'- -GGAC--UGGgCUG-UUCUGU--CUGUCGACG- -5'

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Note:
      When operating RNAhybrid, the pipeline first calculates the perfect minimum free energy (Perfect mfe *) of a putative miRNA when the entire putative miRNA binds to a perfectly complementary target site, then it calculates the minimum free energy of RNA duplex (mfe of the miRNA/mRNA duplex), abbreviated as Rd_mfe. An alignment for which the Rd_mfe to its correspondent Perfect mfe ratio (R_P_ratio #) is more than 66% is regarded as a positive alignment as described by Krek et al. (21). The P_value is calculated by RNAhybrid.

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