Results 41 - 42 of 42 are showing below:
Show page:
<< Previous Page | Next Page >>
ID | Location | Perfect MFE.* | RefSeq Acc. | strand | Start Position | R_P_ratio# | P value |
Predicted miRNA align pattern | |||||||
9605 | 5' | -52.3 | NC_002577.1 | + | 163202 | 0.66 | 0.982296 |
Target: 5'- cUGgCCGCGCGGAGCcgccgGCggUCGg -3' miRNA: 3'- aAUgGGCGUGCCUCGcuua-UGa-AGCg -5' |
|||||||
9605 | 5' | -52.3 | NC_002577.1 | + | 163257 | 0.7 | 0.906843 |
Target: 5'- -cGCCCGCGCGGccggcgggcauguccGGCGGggAUGCagCGUg -3' miRNA: 3'- aaUGGGCGUGCC---------------UCGCU--UAUGaaGCG- -5' |
<< Previous Page | Next Page >>
Note:
When operating RNAhybrid, the pipeline first calculates the perfect minimum free energy (Perfect mfe *) of a putative miRNA when the entire putative miRNA binds to a perfectly complementary target site, then it calculates the minimum free energy of RNA duplex (mfe of the miRNA/mRNA duplex), abbreviated as Rd_mfe. An alignment for which the Rd_mfe to its correspondent Perfect mfe ratio (R_P_ratio #) is more than 66% is regarded as a positive alignment as described by Krek et al. (21). The P_value is calculated by RNAhybrid.
Back To miRNA display CGI home