Results 21 - 40 of 55 are showing below:
Show page:
<< Previous Page | Next Page >>
ID | Location | Perfect MFE.* | RefSeq Acc. | strand | Start Position | R_P_ratio# |
P value![]() |
Predicted miRNA align pattern | |||||||
9685 | 5' | -52.9 | NC_002577.1 | + | 163717 | 0.68 | 0.945828 |
Target: 5'- cCUAACCCUaACCcuaACCCUAAaGGCc -3' miRNA: 3'- -GAUUGGGAcUGGuacUGGGAUUcCCG- -5' |
|||||||
9685 | 5' | -52.9 | NC_002577.1 | + | 163843 | 0.68 | 0.945828 |
Target: 5'- cCUAACCCUaACCcuaACCCUAAaGGCc -3' miRNA: 3'- -GAUUGGGAcUGGuacUGGGAUUcCCG- -5' |
|||||||
9685 | 5' | -52.9 | NC_002577.1 | + | 163811 | 0.68 | 0.945828 |
Target: 5'- cCUAACCCUaACCcuaACCCUAAaGGCc -3' miRNA: 3'- -GAUUGGGAcUGGuacUGGGAUUcCCG- -5' |
|||||||
9685 | 5' | -52.9 | NC_002577.1 | + | 133892 | 0.68 | 0.945828 |
Target: 5'- cCUAACCCUaACCcuaACCCUAAaGGCc -3' miRNA: 3'- -GAUUGGGAcUGGuacUGGGAUUcCCG- -5' |
|||||||
9685 | 5' | -52.9 | NC_002577.1 | + | 163869 | 0.68 | 0.945828 |
Target: 5'- cCUAACCCUaACCcuaACCCUAAaGGCc -3' miRNA: 3'- -GAUUGGGAcUGGuacUGGGAUUcCCG- -5' |
|||||||
9685 | 5' | -52.9 | NC_002577.1 | + | 163947 | 0.68 | 0.945828 |
Target: 5'- cCUAACCCUaACCcuaACCCUAAaGGCc -3' miRNA: 3'- -GAUUGGGAcUGGuacUGGGAUUcCCG- -5' |
|||||||
9685 | 5' | -52.9 | NC_002577.1 | + | 1602 | 0.68 | 0.945828 |
Target: 5'- cCUAcCCCUG-CCA-GGCCCUAacccuacucGGGGg -3' miRNA: 3'- -GAUuGGGACuGGUaCUGGGAU---------UCCCg -5' |
|||||||
9685 | 5' | -52.9 | NC_002577.1 | + | 163691 | 0.68 | 0.945828 |
Target: 5'- cCUAACCCUaACCcuaACCCUAAcGGCc -3' miRNA: 3'- -GAUUGGGAcUGGuacUGGGAUUcCCG- -5' |
|||||||
9685 | 5' | -52.9 | NC_002577.1 | + | 163598 | 0.68 | 0.945828 |
Target: 5'- cCUAACCCUaACCcuaACCCUAAaGGCc -3' miRNA: 3'- -GAUUGGGAcUGGuacUGGGAUUcCCG- -5' |
|||||||
9685 | 5' | -52.9 | NC_002577.1 | + | 163624 | 0.68 | 0.945828 |
Target: 5'- cCUAACCCUaACCcuaACCCUAAcGGCc -3' miRNA: 3'- -GAUUGGGAcUGGuacUGGGAUUcCCG- -5' |
|||||||
9685 | 5' | -52.9 | NC_002577.1 | + | 131487 | 0.68 | 0.936398 |
Target: 5'- cCUAACCCcGACCccGAcacuacCCCUAAaGGCc -3' miRNA: 3'- -GAUUGGGaCUGGuaCU------GGGAUUcCCG- -5' |
|||||||
9685 | 5' | -52.9 | NC_002577.1 | + | 2126 | 0.68 | 0.936398 |
Target: 5'- cCUAACCCcGACCccGAcacuacCCCUAAaGGCc -3' miRNA: 3'- -GAUUGGGaCUGGuaCU------GGGAUUcCCG- -5' |
|||||||
9685 | 5' | -52.9 | NC_002577.1 | + | 163769 | 0.68 | 0.925982 |
Target: 5'- cCUAACCCUGACCcuaACCCUAAc--- -3' miRNA: 3'- -GAUUGGGACUGGuacUGGGAUUcccg -5' |
|||||||
9685 | 5' | -52.9 | NC_002577.1 | + | 163500 | 0.68 | 0.925982 |
Target: 5'- cCUAACCCUGACCcuaACCCUAAc--- -3' miRNA: 3'- -GAUUGGGACUGGuacUGGGAUUcccg -5' |
|||||||
9685 | 5' | -52.9 | NC_002577.1 | + | 163336 | 0.68 | 0.925982 |
Target: 5'- cCUAACCCUGACCcuaACCCUAAc--- -3' miRNA: 3'- -GAUUGGGACUGGuacUGGGAUUcccg -5' |
|||||||
9685 | 5' | -52.9 | NC_002577.1 | + | 133958 | 0.68 | 0.925982 |
Target: 5'- cCUAACCCUGACCcuaACCCUAAc--- -3' miRNA: 3'- -GAUUGGGACUGGuacUGGGAUUcccg -5' |
|||||||
9685 | 5' | -52.9 | NC_002577.1 | + | 133988 | 0.68 | 0.925982 |
Target: 5'- cCUAACCCUGACCcuaACCCUAAc--- -3' miRNA: 3'- -GAUUGGGACUGGuacUGGGAUUcccg -5' |
|||||||
9685 | 5' | -52.9 | NC_002577.1 | + | 293 | 0.68 | 0.925435 |
Target: 5'- cCUGACCCcGACUAUGgacuauuacccuaACCCUGAaaGGCc -3' miRNA: 3'- -GAUUGGGaCUGGUAC-------------UGGGAUUc-CCG- -5' |
|||||||
9685 | 5' | -52.9 | NC_002577.1 | + | 133321 | 0.68 | 0.925435 |
Target: 5'- cCUGACCCcGACUAUGgacuauuacccuaACCCUGAaaGGCc -3' miRNA: 3'- -GAUUGGGaCUGGUAC-------------UGGGAUUc-CCG- -5' |
|||||||
9685 | 5' | -52.9 | NC_002577.1 | + | 2364 | 0.69 | 0.909123 |
Target: 5'- -cGACCC-GACCccuaaacgccuccccUGcCCCUAAGGGCc -3' miRNA: 3'- gaUUGGGaCUGGu--------------ACuGGGAUUCCCG- -5' |
<< Previous Page | Next Page >>
Note:
When operating RNAhybrid, the pipeline first calculates the perfect minimum free energy (Perfect mfe *) of a putative miRNA when the entire putative miRNA binds to a perfectly complementary target site, then it calculates the minimum free energy of RNA duplex (mfe of the miRNA/mRNA duplex), abbreviated as Rd_mfe. An alignment for which the Rd_mfe to its correspondent Perfect mfe ratio (R_P_ratio #) is more than 66% is regarded as a positive alignment as described by Krek et al. (21). The P_value is calculated by RNAhybrid.
Back To miRNA display CGI home