miRNA display CGI

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ID	strand	start position	length	sRNA loop score	core MFE.	NP ORF	Known viral miRNA	Match to own genomic region#	Target prediction with RNAhybrid
2701	+	115143	90	21.5	-30.9	YP_053108		5' arm      3' arm
2702	+	116166	90	20.5	-20.6	YP_053124		5' arm      3' arm
2703	+	116862	89	20	-19.6	YP_053124		5' arm      3' arm
2704	+	117899	89	22.5	-27.5	YP_053108		5' arm      3' arm
2705	+	118067	89	20.5	-23	YP_053124		5' arm      3' arm
2706	+	119076	86	20.5	-22.2			5' arm      3' arm
2707	+	119269	90	23	-20			5' arm      3' arm
2708	+	120583	90	19	-24.7			5' arm      3' arm
2709	+	123283	89	20	-24	YP_053122		5' arm      3' arm
2710	+	123690	89	22.5	-26.3			5' arm      3' arm
2711	+	124654	83	20.5	-28.7	YP_053121		5' arm      3' arm
2712	+	124741	90	22	-21.9	YP_053111		5' arm      3' arm
2713	+	131221	87	20.5	-26.1	YP_053115		5' arm      3' arm
2714	+	135643	90	21.5	-19.5	YP_053118		5' arm      3' arm
2715	+	136880	86	20.5	-25.3	YP_053120		5' arm      3' arm
2716	+	137307	90	21	-22.1	YP_053120		5' arm      3' arm
2717	+	138226	90	20	-28.3	YP_053111		5' arm      3' arm
2718	+	140241	89	21.5	-20	YP_053122		5' arm      3' arm
2719	+	140515	90	21	-23.9			5' arm      3' arm
2720	+	141351	90	22.5	-26.4	YP_053109		5' arm      3' arm

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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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